Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trp53rkaQ5U452 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trp53rkaQ5U452 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.82■□□□□ 0.44
Trp53rkaQ5U452 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trp53rkaQ5U452 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trp53rkaQ5U452 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trp53rkaQ5U452 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trp53rkaQ5U452 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trp53rkaQ5U452 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trp53rkaQ5U452 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trp53rkaQ5U452 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trp53rkaQ5U452 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Trp53rkaQ5U452 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trp53rkaQ5U452 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trp53rkaQ5U452 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trp53rkaQ5U452 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trp53rkaQ5U452 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Trp53rkaQ5U452 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trp53rkaQ5U452 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trp53rkaQ5U452 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trp53rkaQ5U452 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trp53rkaQ5U452 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trp53rkaQ5U452 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trp53rkaQ5U452 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trp53rkaQ5U452 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trp53rkaQ5U452 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trp53rkaQ5U452 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trp53rkaQ5U452 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trp53rkaQ5U452 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trp53rkaQ5U452 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Trp53rkaQ5U452 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trp53rkaQ5U452 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trp53rkaQ5U452 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trp53rkaQ5U452 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trp53rkaQ5U452 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trp53rkaQ5U452 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trp53rkaQ5U452 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trp53rkaQ5U452 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trp53rkaQ5U452 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.76■□□□□ 0.43
Trp53rkaQ5U452 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trp53rkaQ5U452 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trp53rkaQ5U452 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trp53rkaQ5U452 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trp53rkaQ5U452 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trp53rkaQ5U452 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.75■□□□□ 0.43
Trp53rkaQ5U452 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.75■□□□□ 0.43
Trp53rkaQ5U452 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trp53rkaQ5U452 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trp53rkaQ5U452 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trp53rkaQ5U452 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trp53rkaQ5U452 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trp53rkaQ5U452 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trp53rkaQ5U452 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trp53rkaQ5U452 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.73■□□□□ 0.43
Trp53rkaQ5U452 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trp53rkaQ5U452 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trp53rkaQ5U452 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Gm16148-201ENSMUST00000119653 893 ntBASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.72■□□□□ 0.43
Trp53rkaQ5U452 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trp53rkaQ5U452 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trp53rkaQ5U452 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trp53rkaQ5U452 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trp53rkaQ5U452 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trp53rkaQ5U452 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trp53rkaQ5U452 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trp53rkaQ5U452 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.71■□□□□ 0.43
Trp53rkaQ5U452 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trp53rkaQ5U452 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trp53rkaQ5U452 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trp53rkaQ5U452 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trp53rkaQ5U452 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trp53rkaQ5U452 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trp53rkaQ5U452 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trp53rkaQ5U452 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trp53rkaQ5U452 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trp53rkaQ5U452 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trp53rkaQ5U452 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trp53rkaQ5U452 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trp53rkaQ5U452 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trp53rkaQ5U452 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trp53rkaQ5U452 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trp53rkaQ5U452 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trp53rkaQ5U452 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Trp53rkaQ5U452 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trp53rkaQ5U452 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.67■□□□□ 0.42
Trp53rkaQ5U452 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trp53rkaQ5U452 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trp53rkaQ5U452 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trp53rkaQ5U452 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trp53rkaQ5U452 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trp53rkaQ5U452 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trp53rkaQ5U452 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms