Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom1Q5SX79 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.3■■□□□ 1.48
Shroom1Q5SX79 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom1Q5SX79 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom1Q5SX79 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shroom1Q5SX79 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom1Q5SX79 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shroom1Q5SX79 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.28■■□□□ 1.48
Shroom1Q5SX79 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.28■■□□□ 1.48
Shroom1Q5SX79 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.28■■□□□ 1.48
Shroom1Q5SX79 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom1Q5SX79 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom1Q5SX79 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shroom1Q5SX79 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.27■■□□□ 1.48
Shroom1Q5SX79 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.27■■□□□ 1.48
Shroom1Q5SX79 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom1Q5SX79 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.27■■□□□ 1.48
Shroom1Q5SX79 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shroom1Q5SX79 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
Shroom1Q5SX79 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.26■■□□□ 1.47
Shroom1Q5SX79 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shroom1Q5SX79 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom1Q5SX79 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom1Q5SX79 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shroom1Q5SX79 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shroom1Q5SX79 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom1Q5SX79 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.22■■□□□ 1.47
Shroom1Q5SX79 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.21■■□□□ 1.47
Shroom1Q5SX79 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom1Q5SX79 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom1Q5SX79 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
Shroom1Q5SX79 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom1Q5SX79 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Shroom1Q5SX79 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom1Q5SX79 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom1Q5SX79 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Shroom1Q5SX79 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom1Q5SX79 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Shroom1Q5SX79 Terc-201ENSMUST00000082862 423 ntBASIC24.19■■□□□ 1.46
Shroom1Q5SX79 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.19■■□□□ 1.46
Shroom1Q5SX79 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom1Q5SX79 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom1Q5SX79 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom1Q5SX79 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom1Q5SX79 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom1Q5SX79 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Shroom1Q5SX79 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.18■■□□□ 1.46
Shroom1Q5SX79 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.17■■□□□ 1.46
Shroom1Q5SX79 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Shroom1Q5SX79 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Shroom1Q5SX79 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom1Q5SX79 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom1Q5SX79 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom1Q5SX79 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Shroom1Q5SX79 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Shroom1Q5SX79 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom1Q5SX79 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.13■■□□□ 1.45
Shroom1Q5SX79 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Shroom1Q5SX79 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom1Q5SX79 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom1Q5SX79 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom1Q5SX79 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom1Q5SX79 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom1Q5SX79 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom1Q5SX79 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom1Q5SX79 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom1Q5SX79 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom1Q5SX79 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.1■■□□□ 1.45
Shroom1Q5SX79 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom1Q5SX79 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom1Q5SX79 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom1Q5SX79 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Shroom1Q5SX79 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom1Q5SX79 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.1■■□□□ 1.45
Shroom1Q5SX79 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Shroom1Q5SX79 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.09■■□□□ 1.45
Shroom1Q5SX79 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Shroom1Q5SX79 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.08■■□□□ 1.45
Shroom1Q5SX79 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Shroom1Q5SX79 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Shroom1Q5SX79 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Shroom1Q5SX79 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Shroom1Q5SX79 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Shroom1Q5SX79 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Shroom1Q5SX79 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.06■■□□□ 1.44
Shroom1Q5SX79 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.06■■□□□ 1.44
Shroom1Q5SX79 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Shroom1Q5SX79 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Shroom1Q5SX79 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Shroom1Q5SX79 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Shroom1Q5SX79 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.05■■□□□ 1.44
Shroom1Q5SX79 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Shroom1Q5SX79 Gm10420-201ENSMUST00000121713 882 ntBASIC24.04■■□□□ 1.44
Shroom1Q5SX79 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Shroom1Q5SX79 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.02■■□□□ 1.44
Shroom1Q5SX79 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Shroom1Q5SX79 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.01■■□□□ 1.43
Shroom1Q5SX79 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Shroom1Q5SX79 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Shroom1Q5SX79 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.01■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms