Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav8d-1Q5R1H8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.48■□□□□ 0.55
Trav8d-1Q5R1H8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav8d-1Q5R1H8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav8d-1Q5R1H8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav8d-1Q5R1H8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.47■□□□□ 0.55
Trav8d-1Q5R1H8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav8d-1Q5R1H8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trav8d-1Q5R1H8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav8d-1Q5R1H8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav8d-1Q5R1H8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trav8d-1Q5R1H8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav8d-1Q5R1H8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trav8d-1Q5R1H8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav8d-1Q5R1H8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav8d-1Q5R1H8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav8d-1Q5R1H8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav8d-1Q5R1H8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav8d-1Q5R1H8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav8d-1Q5R1H8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav8d-1Q5R1H8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav8d-1Q5R1H8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav8d-1Q5R1H8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav8d-1Q5R1H8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav8d-1Q5R1H8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav8d-1Q5R1H8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8d-1Q5R1H8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8d-1Q5R1H8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8d-1Q5R1H8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8d-1Q5R1H8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav8d-1Q5R1H8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8d-1Q5R1H8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav8d-1Q5R1H8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8d-1Q5R1H8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8d-1Q5R1H8 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.4■□□□□ 0.54
Trav8d-1Q5R1H8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8d-1Q5R1H8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trav8d-1Q5R1H8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8d-1Q5R1H8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8d-1Q5R1H8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav8d-1Q5R1H8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8d-1Q5R1H8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8d-1Q5R1H8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8d-1Q5R1H8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8d-1Q5R1H8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8d-1Q5R1H8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8d-1Q5R1H8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8d-1Q5R1H8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8d-1Q5R1H8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trav8d-1Q5R1H8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8d-1Q5R1H8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8d-1Q5R1H8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8d-1Q5R1H8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Trav8d-1Q5R1H8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav8d-1Q5R1H8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav8d-1Q5R1H8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trav8d-1Q5R1H8 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.36■□□□□ 0.53
Trav8d-1Q5R1H8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav8d-1Q5R1H8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8d-1Q5R1H8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8d-1Q5R1H8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8d-1Q5R1H8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav8d-1Q5R1H8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8d-1Q5R1H8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8d-1Q5R1H8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8d-1Q5R1H8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8d-1Q5R1H8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trav8d-1Q5R1H8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Trav8d-1Q5R1H8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8d-1Q5R1H8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8d-1Q5R1H8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8d-1Q5R1H8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8d-1Q5R1H8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav8d-1Q5R1H8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav8d-1Q5R1H8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.33■□□□□ 0.52
Trav8d-1Q5R1H8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trav8d-1Q5R1H8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trav8d-1Q5R1H8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav8d-1Q5R1H8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav8d-1Q5R1H8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8d-1Q5R1H8 Gm6821-201ENSMUST00000107540 542 ntBASIC18.32■□□□□ 0.52
Trav8d-1Q5R1H8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav8d-1Q5R1H8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav8d-1Q5R1H8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms