Protein–RNA interactions for Protein: Q3UW50

Gm27235, Predicted gene 27235, mousemouse

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm27235Q3UW50 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm27235Q3UW50 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.02□□□□□ -0.16
Gm27235Q3UW50 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Gm27235Q3UW50 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Gm27235Q3UW50 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
Gm27235Q3UW50 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Gm27235Q3UW50 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gm27235Q3UW50 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gm27235Q3UW50 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm27235Q3UW50 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gm27235Q3UW50 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm27235Q3UW50 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm27235Q3UW50 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm27235Q3UW50 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm27235Q3UW50 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm27235Q3UW50 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14□□□□□ -0.17
Gm27235Q3UW50 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm27235Q3UW50 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm27235Q3UW50 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm27235Q3UW50 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm27235Q3UW50 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm27235Q3UW50 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Gm27235Q3UW50 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm27235Q3UW50 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm27235Q3UW50 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gm27235Q3UW50 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gm27235Q3UW50 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm27235Q3UW50 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC13.98□□□□□ -0.17
Gm27235Q3UW50 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gm27235Q3UW50 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Gm27235Q3UW50 Gm42699-201ENSMUST00000198104 1657 ntBASIC13.97□□□□□ -0.17
Gm27235Q3UW50 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Gm27235Q3UW50 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Gm27235Q3UW50 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm27235Q3UW50 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm27235Q3UW50 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Gm27235Q3UW50 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Gm27235Q3UW50 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm27235Q3UW50 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC13.95□□□□□ -0.18
Gm27235Q3UW50 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.95□□□□□ -0.18
Gm27235Q3UW50 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Gm27235Q3UW50 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm27235Q3UW50 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm27235Q3UW50 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gm27235Q3UW50 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Gm7432-201ENSMUST00000210343 879 ntBASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gm27235Q3UW50 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gm27235Q3UW50 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Gm27235Q3UW50 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Gm27235Q3UW50 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.93□□□□□ -0.18
Gm27235Q3UW50 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gm27235Q3UW50 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Gm27235Q3UW50 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gm27235Q3UW50 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gm27235Q3UW50 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gm27235Q3UW50 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gm27235Q3UW50 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gm27235Q3UW50 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Gm27235Q3UW50 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Gm27235Q3UW50 Il17rd-202ENSMUST00000223942 2186 ntBASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Gm11599-201ENSMUST00000118720 878 ntBASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Gm4799-201ENSMUST00000095396 657 ntBASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Gm13889-201ENSMUST00000099689 1386 ntBASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm27235Q3UW50 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Gm27235Q3UW50 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm27235Q3UW50 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC13.89□□□□□ -0.19
Gm27235Q3UW50 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC13.89□□□□□ -0.19
Gm27235Q3UW50 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm27235Q3UW50 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm27235Q3UW50 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms