Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.46■□□□□ 0.23
Cks1brtQ3UNC9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cks1brtQ3UNC9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cks1brtQ3UNC9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cks1brtQ3UNC9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cks1brtQ3UNC9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cks1brtQ3UNC9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cks1brtQ3UNC9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cks1brtQ3UNC9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.45■□□□□ 0.22
Cks1brtQ3UNC9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1brtQ3UNC9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1brtQ3UNC9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cks1brtQ3UNC9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cks1brtQ3UNC9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cks1brtQ3UNC9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cks1brtQ3UNC9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cks1brtQ3UNC9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cks1brtQ3UNC9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cks1brtQ3UNC9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cks1brtQ3UNC9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cks1brtQ3UNC9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cks1brtQ3UNC9 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.42■□□□□ 0.22
Cks1brtQ3UNC9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cks1brtQ3UNC9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cks1brtQ3UNC9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cks1brtQ3UNC9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cks1brtQ3UNC9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cks1brtQ3UNC9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cks1brtQ3UNC9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cks1brtQ3UNC9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cks1brtQ3UNC9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cks1brtQ3UNC9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cks1brtQ3UNC9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cks1brtQ3UNC9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cks1brtQ3UNC9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cks1brtQ3UNC9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1brtQ3UNC9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1brtQ3UNC9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cks1brtQ3UNC9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1brtQ3UNC9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1brtQ3UNC9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1brtQ3UNC9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cks1brtQ3UNC9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1brtQ3UNC9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1brtQ3UNC9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1brtQ3UNC9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1brtQ3UNC9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1brtQ3UNC9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1brtQ3UNC9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cks1brtQ3UNC9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cks1brtQ3UNC9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cks1brtQ3UNC9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cks1brtQ3UNC9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1brtQ3UNC9 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.35■□□□□ 0.21
Cks1brtQ3UNC9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.35■□□□□ 0.21
Cks1brtQ3UNC9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1brtQ3UNC9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1brtQ3UNC9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1brtQ3UNC9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.35■□□□□ 0.21
Cks1brtQ3UNC9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cks1brtQ3UNC9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.34■□□□□ 0.21
Cks1brtQ3UNC9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cks1brtQ3UNC9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cks1brtQ3UNC9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cks1brtQ3UNC9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cks1brtQ3UNC9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Cks1brtQ3UNC9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Cks1brtQ3UNC9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cks1brtQ3UNC9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cks1brtQ3UNC9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cks1brtQ3UNC9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cks1brtQ3UNC9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1brtQ3UNC9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1brtQ3UNC9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cks1brtQ3UNC9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1brtQ3UNC9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cks1brtQ3UNC9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1brtQ3UNC9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cks1brtQ3UNC9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cks1brtQ3UNC9 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.31■□□□□ 0.2
Cks1brtQ3UNC9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cks1brtQ3UNC9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.31■□□□□ 0.2
Cks1brtQ3UNC9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cks1brtQ3UNC9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 272.3 ms