Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.96■■□□□ 1.11
Spg11Q3UHA3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Spg11Q3UHA3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Spg11Q3UHA3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.96■■□□□ 1.11
Spg11Q3UHA3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Spg11Q3UHA3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Spg11Q3UHA3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.95■■□□□ 1.1
Spg11Q3UHA3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Spg11Q3UHA3 Etf1-202ENSMUST00000180351 108 ntBASIC21.95■■□□□ 1.1
Spg11Q3UHA3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Spg11Q3UHA3 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.94■■□□□ 1.1
Spg11Q3UHA3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Spg11Q3UHA3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
Spg11Q3UHA3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Spg11Q3UHA3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Spg11Q3UHA3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Spg11Q3UHA3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Spg11Q3UHA3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Spg11Q3UHA3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Spg11Q3UHA3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.91■■□□□ 1.1
Spg11Q3UHA3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Spg11Q3UHA3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Spg11Q3UHA3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Spg11Q3UHA3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Spg11Q3UHA3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.9■■□□□ 1.1
Spg11Q3UHA3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Spg11Q3UHA3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Spg11Q3UHA3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.89■■□□□ 1.09
Spg11Q3UHA3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Spg11Q3UHA3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.89■■□□□ 1.09
Spg11Q3UHA3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.88■■□□□ 1.09
Spg11Q3UHA3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Spg11Q3UHA3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Spg11Q3UHA3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Spg11Q3UHA3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.88■■□□□ 1.09
Spg11Q3UHA3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Spg11Q3UHA3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Spg11Q3UHA3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Spg11Q3UHA3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Spg11Q3UHA3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Spg11Q3UHA3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Spg11Q3UHA3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Spg11Q3UHA3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Spg11Q3UHA3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Spg11Q3UHA3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Spg11Q3UHA3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Spg11Q3UHA3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.85■■□□□ 1.09
Spg11Q3UHA3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Spg11Q3UHA3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.84■■□□□ 1.09
Spg11Q3UHA3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.84■■□□□ 1.09
Spg11Q3UHA3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.84■■□□□ 1.09
Spg11Q3UHA3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.84■■□□□ 1.09
Spg11Q3UHA3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Spg11Q3UHA3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.83■■□□□ 1.09
Spg11Q3UHA3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.83■■□□□ 1.09
Spg11Q3UHA3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Spg11Q3UHA3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.82■■□□□ 1.08
Spg11Q3UHA3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.82■■□□□ 1.08
Spg11Q3UHA3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Spg11Q3UHA3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Spg11Q3UHA3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Spg11Q3UHA3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.82■■□□□ 1.08
Spg11Q3UHA3 Gm29257-201ENSMUST00000186115 639 ntBASIC21.81■■□□□ 1.08
Spg11Q3UHA3 Terc-201ENSMUST00000082862 423 ntBASIC21.81■■□□□ 1.08
Spg11Q3UHA3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Spg11Q3UHA3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Spg11Q3UHA3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Spg11Q3UHA3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Spg11Q3UHA3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Spg11Q3UHA3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Spg11Q3UHA3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.78■■□□□ 1.08
Spg11Q3UHA3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Spg11Q3UHA3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.78■■□□□ 1.08
Spg11Q3UHA3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.78■■□□□ 1.08
Spg11Q3UHA3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Spg11Q3UHA3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Spg11Q3UHA3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Spg11Q3UHA3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Spg11Q3UHA3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.77■■□□□ 1.08
Spg11Q3UHA3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Spg11Q3UHA3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Spg11Q3UHA3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Spg11Q3UHA3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Spg11Q3UHA3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Spg11Q3UHA3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Spg11Q3UHA3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Spg11Q3UHA3 Gm9847-201ENSMUST00000052528 599 ntBASIC21.76■■□□□ 1.07
Spg11Q3UHA3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.76■■□□□ 1.07
Spg11Q3UHA3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Spg11Q3UHA3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Spg11Q3UHA3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Spg11Q3UHA3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Spg11Q3UHA3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Spg11Q3UHA3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Spg11Q3UHA3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Spg11Q3UHA3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Spg11Q3UHA3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Spg11Q3UHA3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.73■■□□□ 1.07
Spg11Q3UHA3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Spg11Q3UHA3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms