Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.95■□□□□ 0.78
Thbs3Q05895 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs3Q05895 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs3Q05895 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs3Q05895 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs3Q05895 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs3Q05895 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs3Q05895 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Thbs3Q05895 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Thbs3Q05895 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Thbs3Q05895 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.93■□□□□ 0.78
Thbs3Q05895 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.93■□□□□ 0.78
Thbs3Q05895 Gm6311-201ENSMUST00000073790 878 ntBASIC19.93■□□□□ 0.78
Thbs3Q05895 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.92■□□□□ 0.78
Thbs3Q05895 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Thbs3Q05895 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs3Q05895 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.91■□□□□ 0.78
Thbs3Q05895 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs3Q05895 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs3Q05895 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Thbs3Q05895 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs3Q05895 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs3Q05895 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.9■□□□□ 0.78
Thbs3Q05895 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.9■□□□□ 0.78
Thbs3Q05895 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs3Q05895 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Thbs3Q05895 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Thbs3Q05895 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Thbs3Q05895 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Thbs3Q05895 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thbs3Q05895 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Thbs3Q05895 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Thbs3Q05895 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thbs3Q05895 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Thbs3Q05895 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Thbs3Q05895 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Thbs3Q05895 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.87■□□□□ 0.77
Thbs3Q05895 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thbs3Q05895 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Thbs3Q05895 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thbs3Q05895 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Thbs3Q05895 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Thbs3Q05895 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.85■□□□□ 0.77
Thbs3Q05895 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs3Q05895 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs3Q05895 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs3Q05895 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.85■□□□□ 0.77
Thbs3Q05895 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs3Q05895 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs3Q05895 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs3Q05895 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Thbs3Q05895 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Thbs3Q05895 Terc-201ENSMUST00000082862 423 ntBASIC19.84■□□□□ 0.77
Thbs3Q05895 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.84■□□□□ 0.77
Thbs3Q05895 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Thbs3Q05895 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.82■□□□□ 0.76
Thbs3Q05895 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Thbs3Q05895 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs3Q05895 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs3Q05895 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs3Q05895 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.81■□□□□ 0.76
Thbs3Q05895 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs3Q05895 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Thbs3Q05895 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs3Q05895 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs3Q05895 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs3Q05895 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs3Q05895 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs3Q05895 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs3Q05895 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs3Q05895 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Thbs3Q05895 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
Thbs3Q05895 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Thbs3Q05895 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
Thbs3Q05895 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.79■□□□□ 0.76
Thbs3Q05895 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Thbs3Q05895 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Thbs3Q05895 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs3Q05895 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Thbs3Q05895 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.78■□□□□ 0.76
Thbs3Q05895 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.77■□□□□ 0.76
Thbs3Q05895 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Thbs3Q05895 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Thbs3Q05895 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs3Q05895 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Thbs3Q05895 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Thbs3Q05895 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs3Q05895 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs3Q05895 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs3Q05895 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs3Q05895 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.76■□□□□ 0.75
Thbs3Q05895 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Thbs3Q05895 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Thbs3Q05895 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thbs3Q05895 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Thbs3Q05895 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Thbs3Q05895 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thbs3Q05895 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thbs3Q05895 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Thbs3Q05895 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms