Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.21■□□□□ 0.99
Six5P70178 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Six5P70178 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.2■□□□□ 0.98
Six5P70178 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Six5P70178 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Six5P70178 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six5P70178 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.19■□□□□ 0.98
Six5P70178 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Six5P70178 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Six5P70178 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Six5P70178 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six5P70178 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six5P70178 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.18■□□□□ 0.98
Six5P70178 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.18■□□□□ 0.98
Six5P70178 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.18■□□□□ 0.98
Six5P70178 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.18■□□□□ 0.98
Six5P70178 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Six5P70178 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Six5P70178 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Six5P70178 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six5P70178 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six5P70178 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Six5P70178 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Six5P70178 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.17■□□□□ 0.98
Six5P70178 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Six5P70178 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Six5P70178 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Six5P70178 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Six5P70178 Gm6311-201ENSMUST00000073790 878 ntBASIC21.14■□□□□ 0.97
Six5P70178 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six5P70178 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Six5P70178 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.13■□□□□ 0.97
Six5P70178 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Six5P70178 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Six5P70178 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Six5P70178 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.12■□□□□ 0.97
Six5P70178 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Six5P70178 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Six5P70178 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six5P70178 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six5P70178 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.11■□□□□ 0.97
Six5P70178 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Six5P70178 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six5P70178 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six5P70178 Terc-201ENSMUST00000082862 423 ntBASIC21.1■□□□□ 0.97
Six5P70178 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Six5P70178 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Six5P70178 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six5P70178 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Six5P70178 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Six5P70178 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.08■□□□□ 0.97
Six5P70178 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Six5P70178 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six5P70178 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
Six5P70178 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.07■□□□□ 0.96
Six5P70178 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Six5P70178 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.07■□□□□ 0.96
Six5P70178 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Six5P70178 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.05■□□□□ 0.96
Six5P70178 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Six5P70178 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six5P70178 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six5P70178 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Six5P70178 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Six5P70178 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Six5P70178 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Six5P70178 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.03■□□□□ 0.96
Six5P70178 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Six5P70178 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Six5P70178 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.02■□□□□ 0.96
Six5P70178 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Six5P70178 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Six5P70178 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.02■□□□□ 0.96
Six5P70178 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms