Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rplp1P47955 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rplp1P47955 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.46■□□□□ 0.55
Rplp1P47955 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rplp1P47955 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Rplp1P47955 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rplp1P47955 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rplp1P47955 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rplp1P47955 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rplp1P47955 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.45■□□□□ 0.54
Rplp1P47955 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.45■□□□□ 0.54
Rplp1P47955 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rplp1P47955 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Rplp1P47955 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rplp1P47955 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rplp1P47955 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.43■□□□□ 0.54
Rplp1P47955 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rplp1P47955 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Rplp1P47955 Gm4799-201ENSMUST00000095396 657 ntBASIC18.42■□□□□ 0.54
Rplp1P47955 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.41■□□□□ 0.54
Rplp1P47955 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rplp1P47955 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rplp1P47955 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rplp1P47955 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rplp1P47955 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.41■□□□□ 0.54
Rplp1P47955 Gm6311-201ENSMUST00000073790 878 ntBASIC18.41■□□□□ 0.54
Rplp1P47955 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rplp1P47955 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rplp1P47955 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rplp1P47955 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rplp1P47955 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.4■□□□□ 0.54
Rplp1P47955 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.4■□□□□ 0.54
Rplp1P47955 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rplp1P47955 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rplp1P47955 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rplp1P47955 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rplp1P47955 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rplp1P47955 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rplp1P47955 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rplp1P47955 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rplp1P47955 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rplp1P47955 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rplp1P47955 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rplp1P47955 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rplp1P47955 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.37■□□□□ 0.53
Rplp1P47955 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rplp1P47955 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rplp1P47955 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rplp1P47955 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rplp1P47955 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rplp1P47955 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rplp1P47955 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rplp1P47955 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rplp1P47955 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.35■□□□□ 0.53
Rplp1P47955 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rplp1P47955 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rplp1P47955 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.35■□□□□ 0.53
Rplp1P47955 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rplp1P47955 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.34■□□□□ 0.53
Rplp1P47955 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rplp1P47955 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rplp1P47955 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rplp1P47955 Mir3960-201ENSMUST00000198213 73 ntBASIC18.34■□□□□ 0.53
Rplp1P47955 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rplp1P47955 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rplp1P47955 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rplp1P47955 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rplp1P47955 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.33■□□□□ 0.52
Rplp1P47955 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rplp1P47955 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rplp1P47955 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rplp1P47955 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rplp1P47955 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rplp1P47955 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rplp1P47955 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rplp1P47955 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rplp1P47955 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.31■□□□□ 0.52
Rplp1P47955 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rplp1P47955 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rplp1P47955 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.31■□□□□ 0.52
Rplp1P47955 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rplp1P47955 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.3■□□□□ 0.52
Rplp1P47955 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.3■□□□□ 0.52
Rplp1P47955 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Rplp1P47955 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rplp1P47955 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rplp1P47955 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rplp1P47955 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.3■□□□□ 0.52
Rplp1P47955 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.3■□□□□ 0.52
Rplp1P47955 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rplp1P47955 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rplp1P47955 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.3■□□□□ 0.52
Rplp1P47955 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rplp1P47955 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rplp1P47955 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rplp1P47955 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rplp1P47955 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rplp1P47955 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rplp1P47955 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rplp1P47955 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms