Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h1aP43275 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hist1h1aP43275 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hist1h1aP43275 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hist1h1aP43275 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hist1h1aP43275 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h1aP43275 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h1aP43275 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h1aP43275 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h1aP43275 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h1aP43275 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hist1h1aP43275 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h1aP43275 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h1aP43275 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h1aP43275 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h1aP43275 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h1aP43275 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hist1h1aP43275 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Hist1h1aP43275 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hist1h1aP43275 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.58■□□□□ 0.56
Hist1h1aP43275 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Hist1h1aP43275 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h1aP43275 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hist1h1aP43275 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h1aP43275 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hist1h1aP43275 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hist1h1aP43275 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hist1h1aP43275 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Hist1h1aP43275 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hist1h1aP43275 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.56■□□□□ 0.56
Hist1h1aP43275 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.55■□□□□ 0.56
Hist1h1aP43275 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h1aP43275 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Hist1h1aP43275 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hist1h1aP43275 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h1aP43275 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h1aP43275 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h1aP43275 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hist1h1aP43275 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Hist1h1aP43275 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.53■□□□□ 0.56
Hist1h1aP43275 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h1aP43275 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hist1h1aP43275 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hist1h1aP43275 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hist1h1aP43275 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hist1h1aP43275 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Hist1h1aP43275 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hist1h1aP43275 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h1aP43275 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Hist1h1aP43275 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Hist1h1aP43275 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hist1h1aP43275 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hist1h1aP43275 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h1aP43275 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h1aP43275 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h1aP43275 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h1aP43275 Nkain2-201ENSMUST00000092602 558 ntBASIC18.5■□□□□ 0.55
Hist1h1aP43275 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h1aP43275 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hist1h1aP43275 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hist1h1aP43275 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Hist1h1aP43275 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hist1h1aP43275 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hist1h1aP43275 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hist1h1aP43275 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hist1h1aP43275 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Hist1h1aP43275 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hist1h1aP43275 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hist1h1aP43275 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hist1h1aP43275 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h1aP43275 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h1aP43275 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h1aP43275 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.46■□□□□ 0.55
Hist1h1aP43275 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h1aP43275 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Hist1h1aP43275 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Hist1h1aP43275 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h1aP43275 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h1aP43275 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h1aP43275 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h1aP43275 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h1aP43275 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms