Protein–RNA interactions for Protein: P33434

Mmp2, 72 kDa type IV collagenase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp2P33434 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Mmp2P33434 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp2P33434 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp2P33434 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Mmp2P33434 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mmp2P33434 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp2P33434 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Mmp2P33434 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Mmp2P33434 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp2P33434 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Mmp2P33434 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp2P33434 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Mmp2P33434 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Mmp2P33434 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp2P33434 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp2P33434 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp2P33434 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp2P33434 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Mmp2P33434 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp2P33434 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp2P33434 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.09■□□□□ 0.97
Mmp2P33434 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp2P33434 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Mmp2P33434 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Mmp2P33434 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.08■□□□□ 0.96
Mmp2P33434 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mmp2P33434 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp2P33434 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Mmp2P33434 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp2P33434 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mmp2P33434 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp2P33434 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp2P33434 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Mmp2P33434 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp2P33434 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp2P33434 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mmp2P33434 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp2P33434 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.05■□□□□ 0.96
Mmp2P33434 Gm11175-201ENSMUST00000116172 543 ntBASIC21.05■□□□□ 0.96
Mmp2P33434 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mmp2P33434 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.04■□□□□ 0.96
Mmp2P33434 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp2P33434 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.04■□□□□ 0.96
Mmp2P33434 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.04■□□□□ 0.96
Mmp2P33434 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.04■□□□□ 0.96
Mmp2P33434 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.04■□□□□ 0.96
Mmp2P33434 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp2P33434 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp2P33434 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp2P33434 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mmp2P33434 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp2P33434 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp2P33434 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mmp2P33434 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp2P33434 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp2P33434 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mmp2P33434 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Mmp2P33434 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp2P33434 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp2P33434 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp2P33434 Scarna2-201ENSMUST00000157560 414 ntBASIC21.01■□□□□ 0.95
Mmp2P33434 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mmp2P33434 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp2P33434 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mmp2P33434 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp2P33434 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mmp2P33434 Terc-201ENSMUST00000082862 423 ntBASIC21■□□□□ 0.95
Mmp2P33434 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp2P33434 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp2P33434 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp2P33434 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mmp2P33434 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp2P33434 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
Mmp2P33434 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp2P33434 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mmp2P33434 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.97■□□□□ 0.95
Mmp2P33434 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp2P33434 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.97■□□□□ 0.95
Mmp2P33434 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Mmp2P33434 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp2P33434 Mir6538-201ENSMUST00000183713 110 ntBASIC20.97■□□□□ 0.95
Mmp2P33434 Gm9806-201ENSMUST00000051080 552 ntBASIC20.97■□□□□ 0.95
Mmp2P33434 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Mmp2P33434 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp2P33434 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp2P33434 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mmp2P33434 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp2P33434 Gm16437-201ENSMUST00000025669 507 ntBASIC20.96■□□□□ 0.95
Mmp2P33434 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp2P33434 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp2P33434 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mmp2P33434 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.95■□□□□ 0.94
Mmp2P33434 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp2P33434 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp2P33434 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp2P33434 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp2P33434 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp2P33434 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mmp2P33434 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mmp2P33434 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 140.1 ms