Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd8P29595 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd8P29595 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd8P29595 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd8P29595 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd8P29595 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nedd8P29595 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.06■□□□□ 0.96
Nedd8P29595 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Nedd8P29595 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nedd8P29595 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nedd8P29595 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd8P29595 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd8P29595 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd8P29595 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd8P29595 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd8P29595 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nedd8P29595 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.05■□□□□ 0.96
Nedd8P29595 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Nedd8P29595 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd8P29595 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd8P29595 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd8P29595 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nedd8P29595 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nedd8P29595 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nedd8P29595 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nedd8P29595 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.02■□□□□ 0.96
Nedd8P29595 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nedd8P29595 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Nedd8P29595 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nedd8P29595 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nedd8P29595 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nedd8P29595 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nedd8P29595 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.02■□□□□ 0.95
Nedd8P29595 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nedd8P29595 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.01■□□□□ 0.95
Nedd8P29595 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nedd8P29595 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nedd8P29595 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nedd8P29595 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nedd8P29595 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Nedd8P29595 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nedd8P29595 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nedd8P29595 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nedd8P29595 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nedd8P29595 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nedd8P29595 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nedd8P29595 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nedd8P29595 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Nedd8P29595 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nedd8P29595 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nedd8P29595 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nedd8P29595 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nedd8P29595 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nedd8P29595 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nedd8P29595 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Nedd8P29595 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.98■□□□□ 0.95
Nedd8P29595 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.98■□□□□ 0.95
Nedd8P29595 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nedd8P29595 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nedd8P29595 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nedd8P29595 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Nedd8P29595 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nedd8P29595 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nedd8P29595 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.97■□□□□ 0.95
Nedd8P29595 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Nedd8P29595 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd8P29595 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd8P29595 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd8P29595 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd8P29595 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd8P29595 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd8P29595 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nedd8P29595 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Nedd8P29595 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nedd8P29595 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nedd8P29595 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nedd8P29595 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nedd8P29595 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd8P29595 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd8P29595 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd8P29595 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd8P29595 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.93■□□□□ 0.94
Nedd8P29595 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nedd8P29595 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.93■□□□□ 0.94
Nedd8P29595 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.93■□□□□ 0.94
Nedd8P29595 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd8P29595 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd8P29595 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
Nedd8P29595 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nedd8P29595 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.92■□□□□ 0.94
Nedd8P29595 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd8P29595 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd8P29595 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd8P29595 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nedd8P29595 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd8P29595 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nedd8P29595 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.89■□□□□ 0.94
Nedd8P29595 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nedd8P29595 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nedd8P29595 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms