Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cd40P27512 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.66■□□□□ 0.9
Cd40P27512 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40P27512 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cd40P27512 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd40P27512 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.64■□□□□ 0.89
Cd40P27512 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cd40P27512 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cd40P27512 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40P27512 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40P27512 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd40P27512 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cd40P27512 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd40P27512 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd40P27512 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.62■□□□□ 0.89
Cd40P27512 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cd40P27512 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd40P27512 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40P27512 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40P27512 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40P27512 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40P27512 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40P27512 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40P27512 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd40P27512 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd40P27512 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd40P27512 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd40P27512 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.6■□□□□ 0.89
Cd40P27512 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40P27512 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40P27512 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cd40P27512 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd40P27512 Terc-201ENSMUST00000082862 423 ntBASIC20.58■□□□□ 0.89
Cd40P27512 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.58■□□□□ 0.88
Cd40P27512 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.57■□□□□ 0.88
Cd40P27512 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd40P27512 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.56■□□□□ 0.88
Cd40P27512 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.56■□□□□ 0.88
Cd40P27512 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd40P27512 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd40P27512 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd40P27512 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd40P27512 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cd40P27512 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.54■□□□□ 0.88
Cd40P27512 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Cd40P27512 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd40P27512 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40P27512 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40P27512 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
Cd40P27512 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.53■□□□□ 0.88
Cd40P27512 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40P27512 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40P27512 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40P27512 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40P27512 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cd40P27512 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Cd40P27512 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cd40P27512 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Cd40P27512 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd40P27512 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd40P27512 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cd40P27512 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd40P27512 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.5■□□□□ 0.87
Cd40P27512 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.5■□□□□ 0.87
Cd40P27512 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd40P27512 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd40P27512 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd40P27512 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cd40P27512 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.49■□□□□ 0.87
Cd40P27512 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cd40P27512 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cd40P27512 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cd40P27512 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cd40P27512 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd40P27512 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.47■□□□□ 0.87
Cd40P27512 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd40P27512 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd40P27512 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd40P27512 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.46■□□□□ 0.87
Cd40P27512 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cd40P27512 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cd40P27512 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd40P27512 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd40P27512 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd40P27512 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd40P27512 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cd40P27512 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cd40P27512 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.46■□□□□ 0.87
Cd40P27512 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cd40P27512 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd40P27512 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd40P27512 Gm9806-201ENSMUST00000051080 552 ntBASIC20.45■□□□□ 0.86
Cd40P27512 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd40P27512 Scarna2-201ENSMUST00000157560 414 ntBASIC20.44■□□□□ 0.86
Cd40P27512 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd40P27512 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd40P27512 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd40P27512 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd40P27512 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cd40P27512 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms