Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cntn1P12960 Gm27502-201ENSMUST00000183495 199 ntBASIC21.84■■□□□ 1.09
Cntn1P12960 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cntn1P12960 Terc-201ENSMUST00000082862 423 ntBASIC21.84■■□□□ 1.09
Cntn1P12960 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cntn1P12960 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cntn1P12960 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cntn1P12960 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cntn1P12960 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.83■■□□□ 1.09
Cntn1P12960 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cntn1P12960 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cntn1P12960 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.82■■□□□ 1.08
Cntn1P12960 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cntn1P12960 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cntn1P12960 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cntn1P12960 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.81■■□□□ 1.08
Cntn1P12960 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cntn1P12960 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cntn1P12960 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.81■■□□□ 1.08
Cntn1P12960 Gm12366-201ENSMUST00000121722 873 ntBASIC21.81■■□□□ 1.08
Cntn1P12960 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.81■■□□□ 1.08
Cntn1P12960 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.81■■□□□ 1.08
Cntn1P12960 Gm5786-201ENSMUST00000085368 882 ntBASIC21.81■■□□□ 1.08
Cntn1P12960 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cntn1P12960 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cntn1P12960 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Cntn1P12960 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.8■■□□□ 1.08
Cntn1P12960 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.8■■□□□ 1.08
Cntn1P12960 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cntn1P12960 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cntn1P12960 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cntn1P12960 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cntn1P12960 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cntn1P12960 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cntn1P12960 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cntn1P12960 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cntn1P12960 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cntn1P12960 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cntn1P12960 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cntn1P12960 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cntn1P12960 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cntn1P12960 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cntn1P12960 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cntn1P12960 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cntn1P12960 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.75■■□□□ 1.07
Cntn1P12960 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cntn1P12960 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cntn1P12960 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.74■■□□□ 1.07
Cntn1P12960 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.74■■□□□ 1.07
Cntn1P12960 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cntn1P12960 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cntn1P12960 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cntn1P12960 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cntn1P12960 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cntn1P12960 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cntn1P12960 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.72■■□□□ 1.07
Cntn1P12960 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Cntn1P12960 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.72■■□□□ 1.07
Cntn1P12960 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cntn1P12960 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cntn1P12960 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cntn1P12960 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.71■■□□□ 1.07
Cntn1P12960 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cntn1P12960 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cntn1P12960 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cntn1P12960 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cntn1P12960 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cntn1P12960 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cntn1P12960 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cntn1P12960 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntn1P12960 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntn1P12960 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cntn1P12960 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntn1P12960 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntn1P12960 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cntn1P12960 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cntn1P12960 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.68■■□□□ 1.06
Cntn1P12960 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cntn1P12960 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Cntn1P12960 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cntn1P12960 Gm14523-201ENSMUST00000117260 558 ntBASIC21.67■■□□□ 1.06
Cntn1P12960 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.67■■□□□ 1.06
Cntn1P12960 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cntn1P12960 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cntn1P12960 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cntn1P12960 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cntn1P12960 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cntn1P12960 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cntn1P12960 Gm7332-201ENSMUST00000118351 454 ntBASIC21.65■■□□□ 1.06
Cntn1P12960 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cntn1P12960 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cntn1P12960 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms