Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm44428-201ENSMUST00000204474 874 ntBASIC25.79■■□□□ 1.72
Hoxc6P10629 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Hoxc6P10629 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Hoxc6P10629 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Hoxc6P10629 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Hoxc6P10629 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.78■■□□□ 1.72
Hoxc6P10629 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Hoxc6P10629 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Hoxc6P10629 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.78■■□□□ 1.72
Hoxc6P10629 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.77■■□□□ 1.72
Hoxc6P10629 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.77■■□□□ 1.72
Hoxc6P10629 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.76■■□□□ 1.71
Hoxc6P10629 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Hoxc6P10629 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Hoxc6P10629 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Hoxc6P10629 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Hoxc6P10629 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Hoxc6P10629 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Hoxc6P10629 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Hoxc6P10629 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Hoxc6P10629 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Hoxc6P10629 Gm15039-201ENSMUST00000118914 875 ntBASIC25.73■■□□□ 1.71
Hoxc6P10629 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.72■■□□□ 1.71
Hoxc6P10629 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Hoxc6P10629 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Hoxc6P10629 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.71■■□□□ 1.71
Hoxc6P10629 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Hoxc6P10629 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Hoxc6P10629 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Hoxc6P10629 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
Hoxc6P10629 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Hoxc6P10629 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Hoxc6P10629 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Hoxc6P10629 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Hoxc6P10629 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Hoxc6P10629 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
Hoxc6P10629 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Hoxc6P10629 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Hoxc6P10629 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Hoxc6P10629 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.67■■□□□ 1.7
Hoxc6P10629 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Hoxc6P10629 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Hoxc6P10629 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.65■■□□□ 1.7
Hoxc6P10629 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Hoxc6P10629 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Hoxc6P10629 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Hoxc6P10629 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Hoxc6P10629 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc6P10629 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.62■■□□□ 1.69
Hoxc6P10629 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Hoxc6P10629 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.61■■□□□ 1.69
Hoxc6P10629 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hoxc6P10629 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Hoxc6P10629 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Hoxc6P10629 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Hoxc6P10629 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.6■■□□□ 1.69
Hoxc6P10629 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.6■■□□□ 1.69
Hoxc6P10629 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Hoxc6P10629 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
Hoxc6P10629 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Hoxc6P10629 Gm43566-201ENSMUST00000196851 808 ntBASIC25.59■■□□□ 1.69
Hoxc6P10629 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.59■■□□□ 1.69
Hoxc6P10629 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.59■■□□□ 1.69
Hoxc6P10629 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Hoxc6P10629 Gm13238-201ENSMUST00000117655 780 ntBASIC25.58■■□□□ 1.69
Hoxc6P10629 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.58■■□□□ 1.69
Hoxc6P10629 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Hoxc6P10629 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Hoxc6P10629 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Hoxc6P10629 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Hoxc6P10629 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Hoxc6P10629 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Hoxc6P10629 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Hoxc6P10629 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Hoxc6P10629 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Hoxc6P10629 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Hoxc6P10629 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Hoxc6P10629 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hoxc6P10629 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.54■■□□□ 1.68
Hoxc6P10629 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.54■■□□□ 1.68
Hoxc6P10629 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.54■■□□□ 1.68
Hoxc6P10629 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.54■■□□□ 1.68
Hoxc6P10629 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc6P10629 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.53■■□□□ 1.68
Hoxc6P10629 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc6P10629 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hoxc6P10629 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.52■■□□□ 1.68
Hoxc6P10629 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc6P10629 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc6P10629 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Hoxc6P10629 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.51■■□□□ 1.67
Hoxc6P10629 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.51■■□□□ 1.67
Hoxc6P10629 Gm45444-201ENSMUST00000211394 898 ntBASIC25.51■■□□□ 1.67
Hoxc6P10629 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.51■■□□□ 1.67
Hoxc6P10629 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hoxc6P10629 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.51■■□□□ 1.67
Hoxc6P10629 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Hoxc6P10629 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hoxc6P10629 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hoxc6P10629 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms