Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
P06344 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06344 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.31■□□□□ 0.84
P06344 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06344 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.29■□□□□ 0.84
P06344 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P06344 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
P06344 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
P06344 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P06344 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P06344 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P06344 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P06344 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
P06344 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
P06344 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P06344 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
P06344 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.26■□□□□ 0.83
P06344 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P06344 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P06344 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
P06344 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
P06344 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
P06344 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.24■□□□□ 0.83
P06344 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P06344 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P06344 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
P06344 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
P06344 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.23■□□□□ 0.83
P06344 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P06344 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P06344 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P06344 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
P06344 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P06344 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P06344 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
P06344 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
P06344 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P06344 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
P06344 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.21■□□□□ 0.83
P06344 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P06344 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P06344 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.2■□□□□ 0.82
P06344 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P06344 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P06344 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P06344 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.19■□□□□ 0.82
P06344 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P06344 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
P06344 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P06344 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P06344 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
P06344 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P06344 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P06344 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.19■□□□□ 0.82
P06344 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
P06344 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P06344 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P06344 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P06344 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
P06344 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
P06344 Terc-201ENSMUST00000082862 423 ntBASIC20.17■□□□□ 0.82
P06344 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
P06344 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P06344 Cap2-205ENSMUST00000225824 1634 ntBASIC20.16■□□□□ 0.82
P06344 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
P06344 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P06344 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.16■□□□□ 0.82
P06344 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
P06344 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.16■□□□□ 0.82
P06344 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P06344 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P06344 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P06344 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P06344 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.15■□□□□ 0.82
P06344 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P06344 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P06344 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P06344 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P06344 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P06344 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
P06344 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.14■□□□□ 0.81
P06344 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
P06344 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P06344 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P06344 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
P06344 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P06344 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P06344 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P06344 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.13■□□□□ 0.81
P06344 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P06344 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P06344 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
P06344 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P06344 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P06344 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P06344 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P06344 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P06344 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P06344 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
P06344 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms