Protein–RNA interactions for Protein: P06321

T-cell receptor beta chain V region A20.2.25, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06321 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
P06321 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
P06321 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
P06321 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
P06321 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P06321 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
P06321 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.38■□□□□ 0.85
P06321 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
P06321 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06321 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.37■□□□□ 0.85
P06321 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06321 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
P06321 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P06321 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.36■□□□□ 0.85
P06321 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06321 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P06321 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06321 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06321 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
P06321 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06321 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P06321 Gm9812-201ENSMUST00000061934 968 ntBASIC20.34■□□□□ 0.85
P06321 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P06321 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P06321 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.33■□□□□ 0.85
P06321 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
P06321 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
P06321 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
P06321 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
P06321 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.32■□□□□ 0.84
P06321 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06321 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
P06321 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
P06321 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06321 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06321 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
P06321 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P06321 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.31■□□□□ 0.84
P06321 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
P06321 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
P06321 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.3■□□□□ 0.84
P06321 Gm45364-201ENSMUST00000210883 159 ntBASIC20.3■□□□□ 0.84
P06321 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
P06321 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
P06321 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P06321 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P06321 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
P06321 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
P06321 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
P06321 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
P06321 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
P06321 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
P06321 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.28■□□□□ 0.84
P06321 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P06321 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.27■□□□□ 0.84
P06321 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
P06321 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P06321 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
P06321 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.26■□□□□ 0.83
P06321 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
P06321 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
P06321 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.26■□□□□ 0.83
P06321 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
P06321 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
P06321 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
P06321 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.25■□□□□ 0.83
P06321 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
P06321 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P06321 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
P06321 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P06321 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P06321 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.24■□□□□ 0.83
P06321 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
P06321 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
P06321 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P06321 Gm6311-201ENSMUST00000073790 878 ntBASIC20.23■□□□□ 0.83
P06321 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
P06321 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.22■□□□□ 0.83
P06321 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.22■□□□□ 0.83
P06321 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
P06321 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P06321 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.22■□□□□ 0.83
P06321 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.22■□□□□ 0.83
P06321 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
P06321 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
P06321 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P06321 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P06321 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P06321 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P06321 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
P06321 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P06321 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P06321 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
P06321 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.2■□□□□ 0.82
P06321 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
P06321 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P06321 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P06321 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P06321 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.19■□□□□ 0.82
P06321 Terc-201ENSMUST00000082862 423 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms