Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TcraP01849 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TcraP01849 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TcraP01849 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TcraP01849 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TcraP01849 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.5■□□□□ 0.23
TcraP01849 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TcraP01849 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TcraP01849 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TcraP01849 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TcraP01849 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TcraP01849 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TcraP01849 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TcraP01849 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.49■□□□□ 0.23
TcraP01849 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TcraP01849 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TcraP01849 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TcraP01849 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TcraP01849 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TcraP01849 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TcraP01849 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TcraP01849 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TcraP01849 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TcraP01849 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TcraP01849 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.48■□□□□ 0.23
TcraP01849 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TcraP01849 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TcraP01849 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TcraP01849 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TcraP01849 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TcraP01849 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TcraP01849 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TcraP01849 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TcraP01849 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TcraP01849 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TcraP01849 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TcraP01849 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TcraP01849 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TcraP01849 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TcraP01849 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.46■□□□□ 0.23
TcraP01849 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TcraP01849 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TcraP01849 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TcraP01849 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TcraP01849 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.45■□□□□ 0.22
TcraP01849 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TcraP01849 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TcraP01849 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.44■□□□□ 0.22
TcraP01849 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TcraP01849 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.44■□□□□ 0.22
TcraP01849 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TcraP01849 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TcraP01849 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TcraP01849 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TcraP01849 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TcraP01849 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TcraP01849 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TcraP01849 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TcraP01849 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.42■□□□□ 0.22
TcraP01849 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TcraP01849 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TcraP01849 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TcraP01849 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TcraP01849 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TcraP01849 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TcraP01849 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TcraP01849 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TcraP01849 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TcraP01849 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TcraP01849 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TcraP01849 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TcraP01849 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TcraP01849 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TcraP01849 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.39■□□□□ 0.21
TcraP01849 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.39■□□□□ 0.21
TcraP01849 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TcraP01849 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TcraP01849 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TcraP01849 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TcraP01849 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TcraP01849 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TcraP01849 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms