Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tulp3O88413 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tulp3O88413 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tulp3O88413 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tulp3O88413 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tulp3O88413 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tulp3O88413 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tulp3O88413 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tulp3O88413 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tulp3O88413 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tulp3O88413 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tulp3O88413 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tulp3O88413 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tulp3O88413 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tulp3O88413 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tulp3O88413 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tulp3O88413 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tulp3O88413 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Tulp3O88413 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tulp3O88413 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tulp3O88413 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tulp3O88413 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tulp3O88413 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tulp3O88413 Gm45855-201ENSMUST00000212546 880 ntBASIC21.11■□□□□ 0.97
Tulp3O88413 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tulp3O88413 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tulp3O88413 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tulp3O88413 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tulp3O88413 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tulp3O88413 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tulp3O88413 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Tulp3O88413 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tulp3O88413 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Tulp3O88413 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tulp3O88413 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tulp3O88413 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tulp3O88413 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tulp3O88413 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tulp3O88413 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tulp3O88413 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.09■□□□□ 0.97
Tulp3O88413 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.09■□□□□ 0.97
Tulp3O88413 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.09■□□□□ 0.97
Tulp3O88413 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tulp3O88413 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tulp3O88413 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tulp3O88413 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Tulp3O88413 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tulp3O88413 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tulp3O88413 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
Tulp3O88413 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tulp3O88413 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tulp3O88413 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Tulp3O88413 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tulp3O88413 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tulp3O88413 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tulp3O88413 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tulp3O88413 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tulp3O88413 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tulp3O88413 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tulp3O88413 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tulp3O88413 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tulp3O88413 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tulp3O88413 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tulp3O88413 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tulp3O88413 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tulp3O88413 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tulp3O88413 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tulp3O88413 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tulp3O88413 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tulp3O88413 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tulp3O88413 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.03■□□□□ 0.96
Tulp3O88413 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tulp3O88413 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tulp3O88413 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tulp3O88413 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tulp3O88413 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tulp3O88413 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Tulp3O88413 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.02■□□□□ 0.96
Tulp3O88413 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.02■□□□□ 0.96
Tulp3O88413 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
Tulp3O88413 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tulp3O88413 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Tulp3O88413 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tulp3O88413 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tulp3O88413 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Tulp3O88413 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tulp3O88413 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tulp3O88413 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Tulp3O88413 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tulp3O88413 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tulp3O88413 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tulp3O88413 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tulp3O88413 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Tulp3O88413 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tulp3O88413 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tulp3O88413 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tulp3O88413 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.99■□□□□ 0.95
Tulp3O88413 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tulp3O88413 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tulp3O88413 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms