Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC30,68■■■□□ 2,5
Nid2O88322 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30,68■■■□□ 2,5
Nid2O88322 Gm44428-201ENSMUST00000204474 874 ntBASIC30,67■■■□□ 2,5
Nid2O88322 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC30,67■■■□□ 2,5
Nid2O88322 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Nid2O88322 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC30,66■■■□□ 2,5
Nid2O88322 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC30,66■■■□□ 2,5
Nid2O88322 Gm6206-201ENSMUST00000133472 2199 ntBASIC30,66■■■□□ 2,5
Nid2O88322 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30,66■■■□□ 2,5
Nid2O88322 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC30,66■■■□□ 2,5
Nid2O88322 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Nid2O88322 Gm37847-201ENSMUST00000192163 1497 ntBASIC30,64■■■□□ 2,5
Nid2O88322 Gm31748-201ENSMUST00000194938 1497 ntBASIC30,64■■■□□ 2,5
Nid2O88322 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30,64■■■□□ 2,5
Nid2O88322 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30,62■■■□□ 2,49
Nid2O88322 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30,62■■■□□ 2,49
Nid2O88322 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Nid2O88322 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Nid2O88322 Gm13238-201ENSMUST00000117655 780 ntBASIC30,6■■■□□ 2,49
Nid2O88322 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC30,6■■■□□ 2,49
Nid2O88322 Gm43566-201ENSMUST00000196851 808 ntBASIC30,6■■■□□ 2,49
Nid2O88322 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC30,6■■■□□ 2,49
Nid2O88322 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC30,59■■■□□ 2,49
Nid2O88322 AC093043.1-201ENSMUST00000226700 898 ntBASIC30,59■■■□□ 2,49
Nid2O88322 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Nid2O88322 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC30,58■■■□□ 2,49
Nid2O88322 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Nid2O88322 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Nid2O88322 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC30,56■■■□□ 2,48
Nid2O88322 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Nid2O88322 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC30,55■■■□□ 2,48
Nid2O88322 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Nid2O88322 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC30,55■■■□□ 2,48
Nid2O88322 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30,55■■■□□ 2,48
Nid2O88322 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Nid2O88322 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Nid2O88322 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Nid2O88322 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC30,54■■■□□ 2,48
Nid2O88322 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC30,54■■■□□ 2,48
Nid2O88322 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Nid2O88322 Gm15820-201ENSMUST00000201566 728 ntBASIC30,53■■■□□ 2,48
Nid2O88322 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC30,52■■■□□ 2,48
Nid2O88322 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC30,52■■■□□ 2,48
Nid2O88322 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC30,51■■■□□ 2,47
Nid2O88322 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC30,51■■■□□ 2,47
Nid2O88322 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC30,51■■■□□ 2,47
Nid2O88322 Gm43592-201ENSMUST00000196922 1165 ntBASIC30,51■■■□□ 2,47
Nid2O88322 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC30,51■■■□□ 2,47
Nid2O88322 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC30,5■■■□□ 2,47
Nid2O88322 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Nid2O88322 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30,5■■■□□ 2,47
Nid2O88322 Gm45444-201ENSMUST00000211394 898 ntBASIC30,49■■■□□ 2,47
Nid2O88322 Rps24-207ENSMUST00000224568 714 ntBASIC30,49■■■□□ 2,47
Nid2O88322 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Nid2O88322 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Nid2O88322 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Nid2O88322 Nsd1-203ENSMUST00000224156 1149 ntBASIC30,47■■■□□ 2,47
Nid2O88322 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC30,47■■■□□ 2,47
Nid2O88322 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Nid2O88322 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC30,46■■■□□ 2,47
Nid2O88322 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC30,46■■■□□ 2,47
Nid2O88322 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,46
Nid2O88322 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC30,44■■■□□ 2,46
Nid2O88322 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC30,44■■■□□ 2,46
Nid2O88322 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC30,44■■■□□ 2,46
Nid2O88322 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Nid2O88322 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30,42■■■□□ 2,46
Nid2O88322 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Nid2O88322 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30,41■■■□□ 2,46
Nid2O88322 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30,41■■■□□ 2,46
Nid2O88322 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC30,41■■■□□ 2,46
Nid2O88322 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC30,41■■■□□ 2,46
Nid2O88322 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Nid2O88322 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC30,39■■■□□ 2,46
Nid2O88322 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30,39■■■□□ 2,46
Nid2O88322 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC30,39■■■□□ 2,46
Nid2O88322 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC30,39■■■□□ 2,45
Nid2O88322 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Nid2O88322 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC30,37■■■□□ 2,45
Nid2O88322 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Nid2O88322 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC30,37■■■□□ 2,45
Nid2O88322 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30,36■■■□□ 2,45
Nid2O88322 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC30,36■■■□□ 2,45
Nid2O88322 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC30,36■■■□□ 2,45
Nid2O88322 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC30,35■■■□□ 2,45
Nid2O88322 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30,35■■■□□ 2,45
Nid2O88322 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Nid2O88322 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Nid2O88322 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Nid2O88322 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC30,34■■■□□ 2,45
Nid2O88322 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30,34■■■□□ 2,45
Nid2O88322 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC30,33■■■□□ 2,45
Nid2O88322 Gm45102-201ENSMUST00000207427 857 ntBASIC30,33■■■□□ 2,45
Nid2O88322 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC30,33■■■□□ 2,45
Nid2O88322 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Nid2O88322 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30,33■■■□□ 2,45
Nid2O88322 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Nid2O88322 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Nid2O88322 Gm14117-201ENSMUST00000122417 843 ntBASIC30,32■■■□□ 2,44
Nid2O88322 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30,32■■■□□ 2,44
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms