Protein–RNA interactions for Protein: O70343

Ppargc1a, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppargc1aO70343 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ppargc1aO70343 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ppargc1aO70343 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ppargc1aO70343 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ppargc1aO70343 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ppargc1aO70343 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.67■■□□□ 1.38
Ppargc1aO70343 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ppargc1aO70343 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Ppargc1aO70343 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.67■■□□□ 1.38
Ppargc1aO70343 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ppargc1aO70343 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ppargc1aO70343 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ppargc1aO70343 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ppargc1aO70343 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ppargc1aO70343 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ppargc1aO70343 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ppargc1aO70343 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ppargc1aO70343 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.65■■□□□ 1.38
Ppargc1aO70343 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ppargc1aO70343 Mir3960-201ENSMUST00000198213 73 ntBASIC23.65■■□□□ 1.38
Ppargc1aO70343 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.65■■□□□ 1.38
Ppargc1aO70343 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ppargc1aO70343 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ppargc1aO70343 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.64■■□□□ 1.38
Ppargc1aO70343 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ppargc1aO70343 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ppargc1aO70343 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.64■■□□□ 1.37
Ppargc1aO70343 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.64■■□□□ 1.37
Ppargc1aO70343 Gm6311-201ENSMUST00000073790 878 ntBASIC23.64■■□□□ 1.37
Ppargc1aO70343 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ppargc1aO70343 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.64■■□□□ 1.37
Ppargc1aO70343 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ppargc1aO70343 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ppargc1aO70343 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.62■■□□□ 1.37
Ppargc1aO70343 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.62■■□□□ 1.37
Ppargc1aO70343 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ppargc1aO70343 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ppargc1aO70343 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Ppargc1aO70343 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Ppargc1aO70343 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.61■■□□□ 1.37
Ppargc1aO70343 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ppargc1aO70343 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ppargc1aO70343 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ppargc1aO70343 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ppargc1aO70343 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ppargc1aO70343 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Ppargc1aO70343 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ppargc1aO70343 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ppargc1aO70343 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.58■■□□□ 1.37
Ppargc1aO70343 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Ppargc1aO70343 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ppargc1aO70343 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ppargc1aO70343 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.58■■□□□ 1.36
Ppargc1aO70343 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ppargc1aO70343 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ppargc1aO70343 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ppargc1aO70343 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ppargc1aO70343 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.56■■□□□ 1.36
Ppargc1aO70343 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.56■■□□□ 1.36
Ppargc1aO70343 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.56■■□□□ 1.36
Ppargc1aO70343 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.55■■□□□ 1.36
Ppargc1aO70343 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ppargc1aO70343 Gm45364-201ENSMUST00000210883 159 ntBASIC23.55■■□□□ 1.36
Ppargc1aO70343 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ppargc1aO70343 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Ppargc1aO70343 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ppargc1aO70343 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.53■■□□□ 1.36
Ppargc1aO70343 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.53■■□□□ 1.36
Ppargc1aO70343 Gm9812-201ENSMUST00000061934 968 ntBASIC23.52■■□□□ 1.36
Ppargc1aO70343 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
Ppargc1aO70343 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ppargc1aO70343 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Ppargc1aO70343 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ppargc1aO70343 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ppargc1aO70343 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ppargc1aO70343 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ppargc1aO70343 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ppargc1aO70343 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ppargc1aO70343 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ppargc1aO70343 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ppargc1aO70343 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ppargc1aO70343 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ppargc1aO70343 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ppargc1aO70343 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ppargc1aO70343 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ppargc1aO70343 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ppargc1aO70343 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.47■■□□□ 1.35
Ppargc1aO70343 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ppargc1aO70343 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ppargc1aO70343 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ppargc1aO70343 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ppargc1aO70343 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Ppargc1aO70343 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ppargc1aO70343 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Ppargc1aO70343 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Ppargc1aO70343 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ppargc1aO70343 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ppargc1aO70343 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ppargc1aO70343 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.45■■□□□ 1.34
Ppargc1aO70343 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms