Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Abca4O35600 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Abca4O35600 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.31■■□□□ 1.16
Abca4O35600 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Abca4O35600 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Abca4O35600 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Abca4O35600 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Abca4O35600 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Abca4O35600 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Abca4O35600 Terc-201ENSMUST00000082862 423 ntBASIC22.28■■□□□ 1.16
Abca4O35600 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Abca4O35600 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Abca4O35600 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Abca4O35600 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.27■■□□□ 1.16
Abca4O35600 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Abca4O35600 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Abca4O35600 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
Abca4O35600 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
Abca4O35600 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Abca4O35600 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.26■■□□□ 1.15
Abca4O35600 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.26■■□□□ 1.15
Abca4O35600 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Abca4O35600 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abca4O35600 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abca4O35600 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Abca4O35600 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Abca4O35600 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.25■■□□□ 1.15
Abca4O35600 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Abca4O35600 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Abca4O35600 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.24■■□□□ 1.15
Abca4O35600 Gm10232-201ENSMUST00000089221 720 ntBASIC22.24■■□□□ 1.15
Abca4O35600 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.24■■□□□ 1.15
Abca4O35600 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Abca4O35600 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Abca4O35600 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Abca4O35600 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.23■■□□□ 1.15
Abca4O35600 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Abca4O35600 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Abca4O35600 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.22■■□□□ 1.15
Abca4O35600 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Abca4O35600 Etf1-202ENSMUST00000180351 108 ntBASIC22.22■■□□□ 1.15
Abca4O35600 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Abca4O35600 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.22■■□□□ 1.15
Abca4O35600 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Abca4O35600 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Abca4O35600 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.22■■□□□ 1.15
Abca4O35600 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Abca4O35600 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Abca4O35600 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.2■■□□□ 1.14
Abca4O35600 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Abca4O35600 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.2■■□□□ 1.14
Abca4O35600 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Abca4O35600 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.19■■□□□ 1.14
Abca4O35600 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Abca4O35600 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Abca4O35600 Gm9847-201ENSMUST00000052528 599 ntBASIC22.18■■□□□ 1.14
Abca4O35600 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Abca4O35600 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Abca4O35600 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.18■■□□□ 1.14
Abca4O35600 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Abca4O35600 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.17■■□□□ 1.14
Abca4O35600 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Abca4O35600 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Abca4O35600 Gm44428-201ENSMUST00000204474 874 ntBASIC22.15■■□□□ 1.14
Abca4O35600 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.15■■□□□ 1.14
Abca4O35600 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Abca4O35600 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Abca4O35600 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Abca4O35600 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Abca4O35600 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Abca4O35600 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Abca4O35600 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Abca4O35600 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Abca4O35600 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Abca4O35600 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Abca4O35600 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.13■■□□□ 1.13
Abca4O35600 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.13■■□□□ 1.13
Abca4O35600 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Abca4O35600 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Abca4O35600 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.13■■□□□ 1.13
Abca4O35600 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.13■■□□□ 1.13
Abca4O35600 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Abca4O35600 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Abca4O35600 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Abca4O35600 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Abca4O35600 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Abca4O35600 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Abca4O35600 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Abca4O35600 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Abca4O35600 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Abca4O35600 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.1■■□□□ 1.13
Abca4O35600 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.1■■□□□ 1.13
Abca4O35600 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abca4O35600 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Abca4O35600 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.1■■□□□ 1.13
Abca4O35600 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.1■■□□□ 1.13
Abca4O35600 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Abca4O35600 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.09■■□□□ 1.13
Abca4O35600 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Abca4O35600 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms