Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Polr2jO08740 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Polr2jO08740 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.76■■□□□ 1.07
Polr2jO08740 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.76■■□□□ 1.07
Polr2jO08740 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Polr2jO08740 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2jO08740 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2jO08740 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Polr2jO08740 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.75■■□□□ 1.07
Polr2jO08740 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Polr2jO08740 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2jO08740 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Polr2jO08740 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2jO08740 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Polr2jO08740 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2jO08740 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2jO08740 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2jO08740 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
Polr2jO08740 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.72■■□□□ 1.07
Polr2jO08740 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Polr2jO08740 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Polr2jO08740 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Polr2jO08740 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Polr2jO08740 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.72■■□□□ 1.07
Polr2jO08740 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Polr2jO08740 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2jO08740 Nkain2-201ENSMUST00000092602 558 ntBASIC21.71■■□□□ 1.07
Polr2jO08740 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2jO08740 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr2jO08740 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr2jO08740 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr2jO08740 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr2jO08740 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr2jO08740 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Polr2jO08740 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Polr2jO08740 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.68■■□□□ 1.06
Polr2jO08740 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Polr2jO08740 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Polr2jO08740 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr2jO08740 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.67■■□□□ 1.06
Polr2jO08740 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Polr2jO08740 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr2jO08740 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Polr2jO08740 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr2jO08740 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Polr2jO08740 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.65■■□□□ 1.06
Polr2jO08740 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Polr2jO08740 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr2jO08740 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Polr2jO08740 Gm37136-201ENSMUST00000194368 194 ntBASIC21.65■■□□□ 1.06
Polr2jO08740 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.65■■□□□ 1.06
Polr2jO08740 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Polr2jO08740 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Polr2jO08740 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Polr2jO08740 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Polr2jO08740 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Polr2jO08740 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr2jO08740 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Polr2jO08740 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Polr2jO08740 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.63■■□□□ 1.05
Polr2jO08740 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr2jO08740 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr2jO08740 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Polr2jO08740 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Polr2jO08740 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Polr2jO08740 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Polr2jO08740 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Polr2jO08740 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Polr2jO08740 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Polr2jO08740 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.61■■□□□ 1.05
Polr2jO08740 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.61■■□□□ 1.05
Polr2jO08740 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Polr2jO08740 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Polr2jO08740 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Polr2jO08740 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.6■■□□□ 1.05
Polr2jO08740 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.6■■□□□ 1.05
Polr2jO08740 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Polr2jO08740 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Polr2jO08740 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Polr2jO08740 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Polr2jO08740 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Polr2jO08740 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.59■■□□□ 1.05
Polr2jO08740 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Polr2jO08740 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Polr2jO08740 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Polr2jO08740 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Polr2jO08740 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Polr2jO08740 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Polr2jO08740 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Polr2jO08740 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Polr2jO08740 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Polr2jO08740 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Polr2jO08740 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Polr2jO08740 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Polr2jO08740 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Polr2jO08740 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Polr2jO08740 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.57■■□□□ 1.04
Polr2jO08740 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Polr2jO08740 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Polr2jO08740 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms