Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Scn1aA2APX8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24,28■■□□□ 1,48
Scn1aA2APX8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24,28■■□□□ 1,48
Scn1aA2APX8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Scn1aA2APX8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24,28■■□□□ 1,48
Scn1aA2APX8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24,28■■□□□ 1,48
Scn1aA2APX8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24,28■■□□□ 1,48
Scn1aA2APX8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24,28■■□□□ 1,48
Scn1aA2APX8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24,28■■□□□ 1,48
Scn1aA2APX8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24,28■■□□□ 1,48
Scn1aA2APX8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24,27■■□□□ 1,48
Scn1aA2APX8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24,27■■□□□ 1,48
Scn1aA2APX8 Gm12366-201ENSMUST00000121722 873 ntBASIC24,27■■□□□ 1,48
Scn1aA2APX8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24,27■■□□□ 1,48
Scn1aA2APX8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24,27■■□□□ 1,48
Scn1aA2APX8 Gm5786-201ENSMUST00000085368 882 ntBASIC24,27■■□□□ 1,48
Scn1aA2APX8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24,27■■□□□ 1,48
Scn1aA2APX8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24,27■■□□□ 1,48
Scn1aA2APX8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24,27■■□□□ 1,48
Scn1aA2APX8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24,27■■□□□ 1,48
Scn1aA2APX8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24,27■■□□□ 1,48
Scn1aA2APX8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Scn1aA2APX8 Gm27502-201ENSMUST00000183495 199 ntBASIC24,26■■□□□ 1,47
Scn1aA2APX8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24,26■■□□□ 1,47
Scn1aA2APX8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24,25■■□□□ 1,47
Scn1aA2APX8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24,25■■□□□ 1,47
Scn1aA2APX8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Scn1aA2APX8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24,24■■□□□ 1,47
Scn1aA2APX8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24,23■■□□□ 1,47
Scn1aA2APX8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24,23■■□□□ 1,47
Scn1aA2APX8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24,23■■□□□ 1,47
Scn1aA2APX8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24,23■■□□□ 1,47
Scn1aA2APX8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24,22■■□□□ 1,47
Scn1aA2APX8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24,22■■□□□ 1,47
Scn1aA2APX8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24,22■■□□□ 1,47
Scn1aA2APX8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24,22■■□□□ 1,47
Scn1aA2APX8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Scn1aA2APX8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24,21■■□□□ 1,47
Scn1aA2APX8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24,21■■□□□ 1,47
Scn1aA2APX8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Scn1aA2APX8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,21■■□□□ 1,47
Scn1aA2APX8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24,21■■□□□ 1,47
Scn1aA2APX8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24,21■■□□□ 1,47
Scn1aA2APX8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24,2■■□□□ 1,47
Scn1aA2APX8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24,2■■□□□ 1,47
Scn1aA2APX8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24,2■■□□□ 1,46
Scn1aA2APX8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24,2■■□□□ 1,46
Scn1aA2APX8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Scn1aA2APX8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24,19■■□□□ 1,46
Scn1aA2APX8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24,18■■□□□ 1,46
Scn1aA2APX8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24,18■■□□□ 1,46
Scn1aA2APX8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Scn1aA2APX8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24,17■■□□□ 1,46
Scn1aA2APX8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24,17■■□□□ 1,46
Scn1aA2APX8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24,16■■□□□ 1,46
Scn1aA2APX8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24,16■■□□□ 1,46
Scn1aA2APX8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24,16■■□□□ 1,46
Scn1aA2APX8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24,16■■□□□ 1,46
Scn1aA2APX8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24,16■■□□□ 1,46
Scn1aA2APX8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24,16■■□□□ 1,46
Scn1aA2APX8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24,16■■□□□ 1,46
Scn1aA2APX8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24,15■■□□□ 1,46
Scn1aA2APX8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
Scn1aA2APX8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24,15■■□□□ 1,46
Scn1aA2APX8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24,15■■□□□ 1,46
Scn1aA2APX8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24,14■■□□□ 1,46
Scn1aA2APX8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Scn1aA2APX8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Scn1aA2APX8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24,13■■□□□ 1,45
Scn1aA2APX8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Scn1aA2APX8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Scn1aA2APX8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24,12■■□□□ 1,45
Scn1aA2APX8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24,12■■□□□ 1,45
Scn1aA2APX8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Scn1aA2APX8 Gm7332-201ENSMUST00000118351 454 ntBASIC24,11■■□□□ 1,45
Scn1aA2APX8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24,11■■□□□ 1,45
Scn1aA2APX8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24,11■■□□□ 1,45
Scn1aA2APX8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24,1■■□□□ 1,45
Scn1aA2APX8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24,1■■□□□ 1,45
Scn1aA2APX8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24,1■■□□□ 1,45
Scn1aA2APX8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24,1■■□□□ 1,45
Scn1aA2APX8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24,1■■□□□ 1,45
Scn1aA2APX8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Scn1aA2APX8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24,09■■□□□ 1,45
Scn1aA2APX8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Scn1aA2APX8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Scn1aA2APX8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24,08■■□□□ 1,45
Scn1aA2APX8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24,08■■□□□ 1,45
Scn1aA2APX8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24,08■■□□□ 1,45
Scn1aA2APX8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24,08■■□□□ 1,44
Scn1aA2APX8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Scn1aA2APX8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24,07■■□□□ 1,44
Scn1aA2APX8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Scn1aA2APX8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Scn1aA2APX8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24,06■■□□□ 1,44
Scn1aA2APX8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24,06■■□□□ 1,44
Scn1aA2APX8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24,06■■□□□ 1,44
Scn1aA2APX8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24,06■■□□□ 1,44
Scn1aA2APX8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24,06■■□□□ 1,44
Scn1aA2APX8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24,06■■□□□ 1,44
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms