Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav12d-1A0N8R0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-1A0N8R0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Trav12d-1A0N8R0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-1A0N8R0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trav12d-1A0N8R0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-1A0N8R0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav12d-1A0N8R0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav12d-1A0N8R0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12d-1A0N8R0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12d-1A0N8R0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12d-1A0N8R0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav12d-1A0N8R0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Trav12d-1A0N8R0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav12d-1A0N8R0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav12d-1A0N8R0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.27■□□□□ 0.52
Trav12d-1A0N8R0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-1A0N8R0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-1A0N8R0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-1A0N8R0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-1A0N8R0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-1A0N8R0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-1A0N8R0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-1A0N8R0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav12d-1A0N8R0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12d-1A0N8R0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav12d-1A0N8R0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav12d-1A0N8R0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav12d-1A0N8R0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12d-1A0N8R0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12d-1A0N8R0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12d-1A0N8R0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav12d-1A0N8R0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12d-1A0N8R0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12d-1A0N8R0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trav12d-1A0N8R0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav12d-1A0N8R0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
Trav12d-1A0N8R0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav12d-1A0N8R0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Trav12d-1A0N8R0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav12d-1A0N8R0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trav12d-1A0N8R0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trav12d-1A0N8R0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Trav12d-1A0N8R0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav12d-1A0N8R0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12d-1A0N8R0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12d-1A0N8R0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav12d-1A0N8R0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-1A0N8R0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-1A0N8R0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-1A0N8R0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-1A0N8R0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav12d-1A0N8R0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav12d-1A0N8R0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12d-1A0N8R0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12d-1A0N8R0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12d-1A0N8R0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav12d-1A0N8R0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav12d-1A0N8R0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12d-1A0N8R0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trav12d-1A0N8R0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12d-1A0N8R0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav12d-1A0N8R0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.17■□□□□ 0.5
Trav12d-1A0N8R0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav12d-1A0N8R0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav12d-1A0N8R0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12d-1A0N8R0 Gm37136-201ENSMUST00000194368 194 ntBASIC18.15■□□□□ 0.5
Trav12d-1A0N8R0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12d-1A0N8R0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12d-1A0N8R0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12d-1A0N8R0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav12d-1A0N8R0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12d-1A0N8R0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav12d-1A0N8R0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12d-1A0N8R0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12d-1A0N8R0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav12d-1A0N8R0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12d-1A0N8R0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav12d-1A0N8R0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12d-1A0N8R0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav12d-1A0N8R0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.13■□□□□ 0.49
Trav12d-1A0N8R0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav12d-1A0N8R0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.13■□□□□ 0.49
Trav12d-1A0N8R0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12d-1A0N8R0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12d-1A0N8R0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav12d-1A0N8R0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav12d-1A0N8R0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms