Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lnp1A0A1B0GSK3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lnp1A0A1B0GSK3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lnp1A0A1B0GSK3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Lnp1A0A1B0GSK3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lnp1A0A1B0GSK3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lnp1A0A1B0GSK3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lnp1A0A1B0GSK3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lnp1A0A1B0GSK3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lnp1A0A1B0GSK3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lnp1A0A1B0GSK3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lnp1A0A1B0GSK3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lnp1A0A1B0GSK3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Gm4799-201ENSMUST00000095396 657 ntBASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.82■□□□□ 0.6
Lnp1A0A1B0GSK3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lnp1A0A1B0GSK3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lnp1A0A1B0GSK3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lnp1A0A1B0GSK3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.81■□□□□ 0.6
Lnp1A0A1B0GSK3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lnp1A0A1B0GSK3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lnp1A0A1B0GSK3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lnp1A0A1B0GSK3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lnp1A0A1B0GSK3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lnp1A0A1B0GSK3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lnp1A0A1B0GSK3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Lnp1A0A1B0GSK3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lnp1A0A1B0GSK3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.79■□□□□ 0.6
Lnp1A0A1B0GSK3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lnp1A0A1B0GSK3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lnp1A0A1B0GSK3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lnp1A0A1B0GSK3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lnp1A0A1B0GSK3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lnp1A0A1B0GSK3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.78■□□□□ 0.6
Lnp1A0A1B0GSK3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lnp1A0A1B0GSK3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.77■□□□□ 0.6
Lnp1A0A1B0GSK3 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.77■□□□□ 0.6
Lnp1A0A1B0GSK3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lnp1A0A1B0GSK3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lnp1A0A1B0GSK3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lnp1A0A1B0GSK3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lnp1A0A1B0GSK3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.76■□□□□ 0.59
Lnp1A0A1B0GSK3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.76■□□□□ 0.59
Lnp1A0A1B0GSK3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lnp1A0A1B0GSK3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Lnp1A0A1B0GSK3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lnp1A0A1B0GSK3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lnp1A0A1B0GSK3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lnp1A0A1B0GSK3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lnp1A0A1B0GSK3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lnp1A0A1B0GSK3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lnp1A0A1B0GSK3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lnp1A0A1B0GSK3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lnp1A0A1B0GSK3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lnp1A0A1B0GSK3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lnp1A0A1B0GSK3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lnp1A0A1B0GSK3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lnp1A0A1B0GSK3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lnp1A0A1B0GSK3 Mir3960-201ENSMUST00000198213 73 ntBASIC18.73■□□□□ 0.59
Lnp1A0A1B0GSK3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lnp1A0A1B0GSK3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lnp1A0A1B0GSK3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Lnp1A0A1B0GSK3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lnp1A0A1B0GSK3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lnp1A0A1B0GSK3 Gm45364-201ENSMUST00000210883 159 ntBASIC18.72■□□□□ 0.59
Lnp1A0A1B0GSK3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lnp1A0A1B0GSK3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Lnp1A0A1B0GSK3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.71■□□□□ 0.59
Lnp1A0A1B0GSK3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lnp1A0A1B0GSK3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lnp1A0A1B0GSK3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lnp1A0A1B0GSK3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.7■□□□□ 0.58
Lnp1A0A1B0GSK3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lnp1A0A1B0GSK3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lnp1A0A1B0GSK3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lnp1A0A1B0GSK3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lnp1A0A1B0GSK3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lnp1A0A1B0GSK3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lnp1A0A1B0GSK3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lnp1A0A1B0GSK3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.68■□□□□ 0.58
Lnp1A0A1B0GSK3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.68■□□□□ 0.58
Lnp1A0A1B0GSK3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lnp1A0A1B0GSK3 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.68■□□□□ 0.58
Lnp1A0A1B0GSK3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms