Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-52A0A0A6YXC3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-52A0A0A6YXC3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-52A0A0A6YXC3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.26■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-52A0A0A6YXC3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.23■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.22■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Terc-201ENSMUST00000082862 423 ntBASIC17.22■□□□□ 0.35
Ighv1-52A0A0A6YXC3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.21■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-52A0A0A6YXC3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-52A0A0A6YXC3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.21■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-52A0A0A6YXC3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.2■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv1-52A0A0A6YXC3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Gm9806-201ENSMUST00000051080 552 ntBASIC17.18■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Scarna2-201ENSMUST00000157560 414 ntBASIC17.17■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-52A0A0A6YXC3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-52A0A0A6YXC3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Gm11687-201ENSMUST00000118911 886 ntBASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-52A0A0A6YXC3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-52A0A0A6YXC3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Gm16437-201ENSMUST00000025669 507 ntBASIC17.12■□□□□ 0.33
Ighv1-52A0A0A6YXC3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms