Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav6d-5A0A075B6B9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trav6d-5A0A075B6B9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6d-5A0A075B6B9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6d-5A0A075B6B9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav6d-5A0A075B6B9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.44■□□□□ 0.54
Trav6d-5A0A075B6B9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav6d-5A0A075B6B9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6d-5A0A075B6B9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6d-5A0A075B6B9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6d-5A0A075B6B9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6d-5A0A075B6B9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6d-5A0A075B6B9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6d-5A0A075B6B9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav6d-5A0A075B6B9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6d-5A0A075B6B9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6d-5A0A075B6B9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6d-5A0A075B6B9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6d-5A0A075B6B9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav6d-5A0A075B6B9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6d-5A0A075B6B9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Trav6d-5A0A075B6B9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav6d-5A0A075B6B9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6d-5A0A075B6B9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trav6d-5A0A075B6B9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6d-5A0A075B6B9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav6d-5A0A075B6B9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6d-5A0A075B6B9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6d-5A0A075B6B9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6d-5A0A075B6B9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6d-5A0A075B6B9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6d-5A0A075B6B9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6d-5A0A075B6B9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trav6d-5A0A075B6B9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav6d-5A0A075B6B9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6d-5A0A075B6B9 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.39■□□□□ 0.53
Trav6d-5A0A075B6B9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav6d-5A0A075B6B9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav6d-5A0A075B6B9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6d-5A0A075B6B9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Trav6d-5A0A075B6B9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6d-5A0A075B6B9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Trav6d-5A0A075B6B9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6d-5A0A075B6B9 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav6d-5A0A075B6B9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6d-5A0A075B6B9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6d-5A0A075B6B9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6d-5A0A075B6B9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6d-5A0A075B6B9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6d-5A0A075B6B9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.34■□□□□ 0.53
Trav6d-5A0A075B6B9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6d-5A0A075B6B9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6d-5A0A075B6B9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6d-5A0A075B6B9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6d-5A0A075B6B9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6d-5A0A075B6B9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6d-5A0A075B6B9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6d-5A0A075B6B9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-5A0A075B6B9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav6d-5A0A075B6B9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-5A0A075B6B9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-5A0A075B6B9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-5A0A075B6B9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-5A0A075B6B9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6d-5A0A075B6B9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6d-5A0A075B6B9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav6d-5A0A075B6B9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6d-5A0A075B6B9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav6d-5A0A075B6B9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms