Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18,81■□□□□ 0,6
Trav5-4A0A075B652 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18,81■□□□□ 0,6
Trav5-4A0A075B652 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav5-4A0A075B652 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav5-4A0A075B652 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18,8■□□□□ 0,6
Trav5-4A0A075B652 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18,8■□□□□ 0,6
Trav5-4A0A075B652 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18,8■□□□□ 0,6
Trav5-4A0A075B652 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18,8■□□□□ 0,6
Trav5-4A0A075B652 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18,8■□□□□ 0,6
Trav5-4A0A075B652 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18,79■□□□□ 0,6
Trav5-4A0A075B652 Gm8503-201ENSMUST00000118131 455 ntBASIC18,79■□□□□ 0,6
Trav5-4A0A075B652 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18,79■□□□□ 0,6
Trav5-4A0A075B652 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18,79■□□□□ 0,6
Trav5-4A0A075B652 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18,78■□□□□ 0,6
Trav5-4A0A075B652 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18,78■□□□□ 0,6
Trav5-4A0A075B652 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18,78■□□□□ 0,6
Trav5-4A0A075B652 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18,78■□□□□ 0,6
Trav5-4A0A075B652 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18,78■□□□□ 0,6
Trav5-4A0A075B652 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18,77■□□□□ 0,6
Trav5-4A0A075B652 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18,77■□□□□ 0,6
Trav5-4A0A075B652 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18,77■□□□□ 0,6
Trav5-4A0A075B652 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18,77■□□□□ 0,6
Trav5-4A0A075B652 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18,77■□□□□ 0,6
Trav5-4A0A075B652 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18,77■□□□□ 0,6
Trav5-4A0A075B652 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18,77■□□□□ 0,6
Trav5-4A0A075B652 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18,77■□□□□ 0,59
Trav5-4A0A075B652 Gm4419-202ENSMUST00000226239 1431 ntBASIC18,76■□□□□ 0,59
Trav5-4A0A075B652 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18,76■□□□□ 0,59
Trav5-4A0A075B652 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18,76■□□□□ 0,59
Trav5-4A0A075B652 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18,76■□□□□ 0,59
Trav5-4A0A075B652 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18,75■□□□□ 0,59
Trav5-4A0A075B652 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18,75■□□□□ 0,59
Trav5-4A0A075B652 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18,75■□□□□ 0,59
Trav5-4A0A075B652 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18,75■□□□□ 0,59
Trav5-4A0A075B652 Il17rd-202ENSMUST00000223942 2186 ntBASIC18,75■□□□□ 0,59
Trav5-4A0A075B652 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18,75■□□□□ 0,59
Trav5-4A0A075B652 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18,74■□□□□ 0,59
Trav5-4A0A075B652 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18,74■□□□□ 0,59
Trav5-4A0A075B652 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18,74■□□□□ 0,59
Trav5-4A0A075B652 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18,74■□□□□ 0,59
Trav5-4A0A075B652 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18,74■□□□□ 0,59
Trav5-4A0A075B652 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18,74■□□□□ 0,59
Trav5-4A0A075B652 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18,74■□□□□ 0,59
Trav5-4A0A075B652 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18,73■□□□□ 0,59
Trav5-4A0A075B652 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18,72■□□□□ 0,59
Trav5-4A0A075B652 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18,72■□□□□ 0,59
Trav5-4A0A075B652 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18,72■□□□□ 0,59
Trav5-4A0A075B652 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18,72■□□□□ 0,59
Trav5-4A0A075B652 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18,72■□□□□ 0,59
Trav5-4A0A075B652 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18,72■□□□□ 0,59
Trav5-4A0A075B652 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Trav5-4A0A075B652 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Trav5-4A0A075B652 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18,71■□□□□ 0,59
Trav5-4A0A075B652 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Trav5-4A0A075B652 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18,71■□□□□ 0,59
Trav5-4A0A075B652 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18,71■□□□□ 0,59
Trav5-4A0A075B652 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18,71■□□□□ 0,58
Trav5-4A0A075B652 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18,7■□□□□ 0,58
Trav5-4A0A075B652 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18,7■□□□□ 0,58
Trav5-4A0A075B652 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18,7■□□□□ 0,58
Trav5-4A0A075B652 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18,7■□□□□ 0,58
Trav5-4A0A075B652 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18,69■□□□□ 0,58
Trav5-4A0A075B652 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18,69■□□□□ 0,58
Trav5-4A0A075B652 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18,69■□□□□ 0,58
Trav5-4A0A075B652 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18,68■□□□□ 0,58
Trav5-4A0A075B652 Gm42699-201ENSMUST00000198104 1657 ntBASIC18,67■□□□□ 0,58
Trav5-4A0A075B652 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18,67■□□□□ 0,58
Trav5-4A0A075B652 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18,67■□□□□ 0,58
Trav5-4A0A075B652 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18,67■□□□□ 0,58
Trav5-4A0A075B652 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18,67■□□□□ 0,58
Trav5-4A0A075B652 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18,67■□□□□ 0,58
Trav5-4A0A075B652 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18,66■□□□□ 0,58
Trav5-4A0A075B652 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18,66■□□□□ 0,58
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms