Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav4-2A0A075B638 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav4-2A0A075B638 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav4-2A0A075B638 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.08■□□□□ 0.48
Trav4-2A0A075B638 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav4-2A0A075B638 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav4-2A0A075B638 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav4-2A0A075B638 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav4-2A0A075B638 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav4-2A0A075B638 Gm24804-201ENSMUST00000174982 85 ntBASIC18.07■□□□□ 0.48
Trav4-2A0A075B638 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.06■□□□□ 0.48
Trav4-2A0A075B638 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav4-2A0A075B638 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.06■□□□□ 0.48
Trav4-2A0A075B638 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav4-2A0A075B638 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav4-2A0A075B638 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav4-2A0A075B638 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav4-2A0A075B638 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-2A0A075B638 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-2A0A075B638 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-2A0A075B638 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.04■□□□□ 0.48
Trav4-2A0A075B638 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-2A0A075B638 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-2A0A075B638 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav4-2A0A075B638 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav4-2A0A075B638 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trav4-2A0A075B638 Gm30023-201ENSMUST00000197970 889 ntBASIC18.03■□□□□ 0.48
Trav4-2A0A075B638 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.03■□□□□ 0.48
Trav4-2A0A075B638 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.03■□□□□ 0.48
Trav4-2A0A075B638 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav4-2A0A075B638 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Trav4-2A0A075B638 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav4-2A0A075B638 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav4-2A0A075B638 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav4-2A0A075B638 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav4-2A0A075B638 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav4-2A0A075B638 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-2A0A075B638 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-2A0A075B638 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trav4-2A0A075B638 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-2A0A075B638 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav4-2A0A075B638 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-2A0A075B638 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-2A0A075B638 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-2A0A075B638 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18■□□□□ 0.47
Trav4-2A0A075B638 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav4-2A0A075B638 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav4-2A0A075B638 Gm14121-201ENSMUST00000121441 1380 ntBASIC18■□□□□ 0.47
Trav4-2A0A075B638 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav4-2A0A075B638 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav4-2A0A075B638 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav4-2A0A075B638 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav4-2A0A075B638 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav4-2A0A075B638 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav4-2A0A075B638 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trav4-2A0A075B638 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-2A0A075B638 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-2A0A075B638 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-2A0A075B638 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-2A0A075B638 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav4-2A0A075B638 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4-2A0A075B638 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4-2A0A075B638 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4-2A0A075B638 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav4-2A0A075B638 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav4-2A0A075B638 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav4-2A0A075B638 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav4-2A0A075B638 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.96■□□□□ 0.47
Trav4-2A0A075B638 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav4-2A0A075B638 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav4-2A0A075B638 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav4-2A0A075B638 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4-2A0A075B638 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4-2A0A075B638 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4-2A0A075B638 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4-2A0A075B638 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav4-2A0A075B638 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.95■□□□□ 0.46
Trav4-2A0A075B638 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.94■□□□□ 0.46
Trav4-2A0A075B638 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4-2A0A075B638 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4-2A0A075B638 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4-2A0A075B638 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav4-2A0A075B638 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav4-2A0A075B638 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Trav4-2A0A075B638 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav4-2A0A075B638 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav4-2A0A075B638 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav4-2A0A075B638 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav4-2A0A075B638 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav4-2A0A075B638 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav4-2A0A075B638 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms