Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 MIR663A-201ENST00000385250 93 ntBASIC16.78■□□□□ 0.28
HMG20AQ9NP66 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 AL356309.3-201ENST00000624132 1934 ntBASIC16.78■□□□□ 0.28
HMG20AQ9NP66 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.77■□□□□ 0.28
HMG20AQ9NP66 AC138028.4-201ENST00000564984 1845 ntBASIC16.77■□□□□ 0.28
HMG20AQ9NP66 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 BX276092.2-201ENST00000417668 665 ntBASIC16.77■□□□□ 0.28
HMG20AQ9NP66 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HMG20AQ9NP66 AC022211.2-201ENST00000585075 2527 ntBASIC16.77■□□□□ 0.28
HMG20AQ9NP66 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
HMG20AQ9NP66 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 CROCCP5-201ENST00000436658 830 ntBASIC16.76■□□□□ 0.27
HMG20AQ9NP66 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMG20AQ9NP66 CICP6-201ENST00000457191 2729 ntBASIC16.76■□□□□ 0.27
HMG20AQ9NP66 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMG20AQ9NP66 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms