Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Gm2423-201ENSMUST00000074863 733 ntBASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Scn5aQ9JJV9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Scn5aQ9JJV9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Scn5aQ9JJV9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Scn5aQ9JJV9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Scn5aQ9JJV9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Scn5aQ9JJV9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Gm13015-201ENSMUST00000118674 204 ntBASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Gm27920-201ENSMUST00000183953 96 ntBASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Mir6977-201ENSMUST00000184960 64 ntBASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Scn5aQ9JJV9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Scn5aQ9JJV9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms