Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.55□□□□□ -0.4
Smco4Q9JIS3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Gm13234-201ENSMUST00000120010 747 ntBASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smco4Q9JIS3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Gm6420-201ENSMUST00000193885 723 ntBASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Smco4Q9JIS3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smco4Q9JIS3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco4Q9JIS3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco4Q9JIS3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smco4Q9JIS3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smco4Q9JIS3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Gm2399-201ENSMUST00000104944 225 ntBASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms