Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ap3s1Q9DCR2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Gm12085-201ENSMUST00000119263 940 ntBASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ap3s1Q9DCR2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ap3s1Q9DCR2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ap3s1Q9DCR2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Gm44450-201ENSMUST00000199528 114 ntBASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Gm18421-201ENSMUST00000204122 625 ntBASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.89□□□□□ -0.19
Ap3s1Q9DCR2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ap3s1Q9DCR2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ap3s1Q9DCR2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.87□□□□□ -0.19
Ap3s1Q9DCR2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ap3s1Q9DCR2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ap3s1Q9DCR2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ap3s1Q9DCR2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ap3s1Q9DCR2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms