Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk3bl1Q9D701 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Gm12933-201ENSMUST00000120203 872 ntBASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Gm18666-201ENSMUST00000190039 958 ntBASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.19□□□□□ -0.14
Upk3bl1Q9D701 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk3bl1Q9D701 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk3bl1Q9D701 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms