Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps33aQ9D2N9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Gm12441-201ENSMUST00000121806 588 ntBASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Gm27275-201ENSMUST00000184318 272 ntBASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps33aQ9D2N9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps33aQ9D2N9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Gm20049-201ENSMUST00000219950 730 ntBASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps33aQ9D2N9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps33aQ9D2N9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vps33aQ9D2N9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms