Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc3Q9CW03 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc3Q9CW03 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smc3Q9CW03 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Gm29518-201ENSMUST00000190858 372 ntBASIC18.32■□□□□ 0.52
Smc3Q9CW03 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smc3Q9CW03 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Gm15794-201ENSMUST00000120182 631 ntBASIC18.31■□□□□ 0.52
Smc3Q9CW03 Gm25016-201ENSMUST00000158399 131 ntBASIC18.31■□□□□ 0.52
Smc3Q9CW03 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.31■□□□□ 0.52
Smc3Q9CW03 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc3Q9CW03 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Gm25406-201ENSMUST00000157599 105 ntBASIC18.3■□□□□ 0.52
Smc3Q9CW03 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc3Q9CW03 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.29■□□□□ 0.52
Smc3Q9CW03 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Gm7367-201ENSMUST00000057611 492 ntBASIC18.29■□□□□ 0.52
Smc3Q9CW03 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.29■□□□□ 0.52
Smc3Q9CW03 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc3Q9CW03 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smc3Q9CW03 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms