Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cotl1Q9CQI6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cotl1Q9CQI6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cotl1Q9CQI6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cotl1Q9CQI6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cotl1Q9CQI6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cotl1Q9CQI6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Cotl1Q9CQI6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cotl1Q9CQI6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cotl1Q9CQI6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cotl1Q9CQI6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cotl1Q9CQI6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Gm12085-201ENSMUST00000119263 940 ntBASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Gm10698-201ENSMUST00000182663 604 ntBASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Gm9731-201ENSMUST00000209480 747 ntBASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cotl1Q9CQI6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.25□□□□□ -0.45
Cotl1Q9CQI6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms