Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Krt88Q9CPR6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Gm2274-201ENSMUST00000184539 609 ntBASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Krt88Q9CPR6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Mir6982-201ENSMUST00000184354 68 ntBASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.06□□□□□ -0.16
Krt88Q9CPR6 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt88Q9CPR6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.05□□□□□ -0.16
Krt88Q9CPR6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt88Q9CPR6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.04□□□□□ -0.16
Krt88Q9CPR6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms