Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb3Q91XZ7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gm7370-201ENSMUST00000219471 767 ntBASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb3Q91XZ7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb3Q91XZ7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb3Q91XZ7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.58■□□□□ 0.09
Pcdhb3Q91XZ7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb3Q91XZ7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb3Q91XZ7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Gm6345-202ENSMUST00000180900 204 ntBASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb3Q91XZ7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Gm27389-201ENSMUST00000183622 195 ntBASIC15.57■□□□□ 0.08
Pcdhb3Q91XZ7 Mir1668-201ENSMUST00000184114 107 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms