Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb6Q91XZ4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm27459-201ENSMUST00000184860 107 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44357-201ENSMUST00000195897 142 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm19658-201ENSMUST00000196231 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44367-201ENSMUST00000196836 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44350-201ENSMUST00000197197 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44390-201ENSMUST00000197533 144 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44313-201ENSMUST00000198018 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44486-201ENSMUST00000198508 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44314-201ENSMUST00000199263 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44394-201ENSMUST00000199558 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44484-201ENSMUST00000199873 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44466-201ENSMUST00000200264 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gm44359-201ENSMUST00000200671 138 ntBASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb6Q91XZ4 BC037039-201ENSMUST00000192003 2205 ntBASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Gm4535-201ENSMUST00000182274 558 ntBASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Gm10355-201ENSMUST00000097146 517 ntBASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb6Q91XZ4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb6Q91XZ4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Pcdhb6Q91XZ4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb6Q91XZ4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb6Q91XZ4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb6Q91XZ4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb6Q91XZ4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Gm27646-201ENSMUST00000183989 110 ntBASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Gm10819-201ENSMUST00000099988 561 ntBASIC15.95■□□□□ 0.14
Pcdhb6Q91XZ4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms