Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh18Q8VHR0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdh18Q8VHR0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Mir1668-201ENSMUST00000184114 107 ntBASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Gm18421-201ENSMUST00000204122 625 ntBASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Gm10566-201ENSMUST00000086739 996 ntBASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Pcdh18Q8VHR0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Mir7071-201ENSMUST00000184847 69 ntBASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdh18Q8VHR0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Gm26039-201ENSMUST00000158152 144 ntBASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Gm7889-201ENSMUST00000185591 958 ntBASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Gm43799-201ENSMUST00000201845 579 ntBASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Gm45058-201ENSMUST00000205810 766 ntBASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdh18Q8VHR0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Gm29707-201ENSMUST00000196325 491 ntBASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdh18Q8VHR0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Pcdh18Q8VHR0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms