Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpap2Q8VC34 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpap2Q8VC34 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Gm7862-201ENSMUST00000121461 292 ntBASIC17.05■□□□□ 0.32
Rpap2Q8VC34 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Grk6-207ENSMUST00000225925 2769 ntBASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpap2Q8VC34 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpap2Q8VC34 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.03■□□□□ 0.32
Rpap2Q8VC34 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms