Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chrna3Q8R4G9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Gm1401-201ENSMUST00000122048 772 ntBASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chrna3Q8R4G9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.27■□□□□ 0.03
Chrna3Q8R4G9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Gm13036-201ENSMUST00000117799 748 ntBASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Gm18206-201ENSMUST00000207027 926 ntBASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chrna3Q8R4G9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 AW822252-206ENSMUST00000208904 237 ntBASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chrna3Q8R4G9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chrna3Q8R4G9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chrna3Q8R4G9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chrna3Q8R4G9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chrna3Q8R4G9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chrna3Q8R4G9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chrna3Q8R4G9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms