Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Gm11594-201ENSMUST00000122313 162 ntBASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps53Q8CCB4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Vps53Q8CCB4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps53Q8CCB4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps53Q8CCB4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Mir5126-201ENSMUST00000175513 77 ntBASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.07■□□□□ 0.48
Vps53Q8CCB4 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps53Q8CCB4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps53Q8CCB4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.05■□□□□ 0.48
Vps53Q8CCB4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms