Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nhlrc1Q8BR37 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Gm8344-201ENSMUST00000119813 856 ntBASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Gm27628-201ENSMUST00000184911 107 ntBASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nhlrc1Q8BR37 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nhlrc1Q8BR37 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nhlrc1Q8BR37 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Gm6736-201ENSMUST00000166583 948 ntBASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nhlrc1Q8BR37 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Gm11594-201ENSMUST00000122313 162 ntBASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Gm12260-201ENSMUST00000122447 411 ntBASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.07□□□□□ -0.48
Nhlrc1Q8BR37 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms