Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Mir1199-201ENSMUST00000117015 119 ntBASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Odf3b-204ENSMUST00000227834 930 ntBASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn3bQ8BHK2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn3bQ8BHK2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scn3bQ8BHK2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Scn3bQ8BHK2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms