Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Gm6443-201ENSMUST00000203599 874 ntBASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Depdc1bQ8BH88 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Depdc1bQ8BH88 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Gm18733-201ENSMUST00000173950 856 ntBASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Depdc1bQ8BH88 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Depdc1bQ8BH88 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.89■□□□□ 0.3
Depdc1bQ8BH88 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Depdc1bQ8BH88 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Gm27867-201ENSMUST00000184778 125 ntBASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Depdc1bQ8BH88 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Depdc1bQ8BH88 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms