Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav2Q5R1I9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Gm8000-201ENSMUST00000188378 592 ntBASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Gm37153-201ENSMUST00000193637 231 ntBASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav2Q5R1I9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Gm14140-201ENSMUST00000119999 995 ntBASIC12.41□□□□□ -0.42
Trav2Q5R1I9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.41□□□□□ -0.42
Trav2Q5R1I9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav2Q5R1I9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav2Q5R1I9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms