Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3-3Q5R1C3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Mtag2-201ENSMUST00000058665 714 ntBASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3-3Q5R1C3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3-3Q5R1C3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav3-3Q5R1C3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms